Protein–RNA interactions for Protein: J3KMR8

Gm17535, Predicted gene, 17535, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17535J3KMR8 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm17535J3KMR8 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm17535J3KMR8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gm17535J3KMR8 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Gm17535J3KMR8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.54■□□□□ 0.56
Gm17535J3KMR8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Gm17535J3KMR8 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.54■□□□□ 0.56
Gm17535J3KMR8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.54■□□□□ 0.56
Gm17535J3KMR8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm17535J3KMR8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Gm17535J3KMR8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm17535J3KMR8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gm17535J3KMR8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.54■□□□□ 0.56
Gm17535J3KMR8 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm17535J3KMR8 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm17535J3KMR8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm17535J3KMR8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Gm17535J3KMR8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Gm17535J3KMR8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm17535J3KMR8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gm17535J3KMR8 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gm17535J3KMR8 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gm17535J3KMR8 Mir5130-201ENSMUST00000175160 84 ntBASIC18.53■□□□□ 0.56
Gm17535J3KMR8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.53■□□□□ 0.56
Gm17535J3KMR8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.53■□□□□ 0.56
Gm17535J3KMR8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm17535J3KMR8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm17535J3KMR8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm17535J3KMR8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Gm17535J3KMR8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Gm17535J3KMR8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm17535J3KMR8 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.52■□□□□ 0.56
Gm17535J3KMR8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm17535J3KMR8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm17535J3KMR8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.52■□□□□ 0.56
Gm17535J3KMR8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Gm17535J3KMR8 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm17535J3KMR8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm17535J3KMR8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
Gm17535J3KMR8 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.52■□□□□ 0.55
Gm17535J3KMR8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gm17535J3KMR8 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm17535J3KMR8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.51■□□□□ 0.55
Gm17535J3KMR8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.51■□□□□ 0.55
Gm17535J3KMR8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.51■□□□□ 0.55
Gm17535J3KMR8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Gm17535J3KMR8 Gm16061-201ENSMUST00000122167 857 ntBASIC18.51■□□□□ 0.55
Gm17535J3KMR8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.51■□□□□ 0.55
Gm17535J3KMR8 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gm17535J3KMR8 Gm18032-201ENSMUST00000222541 538 ntBASIC18.51■□□□□ 0.55
Gm17535J3KMR8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm17535J3KMR8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.51■□□□□ 0.55
Gm17535J3KMR8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.51■□□□□ 0.55
Gm17535J3KMR8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Gm17535J3KMR8 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm17535J3KMR8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.51■□□□□ 0.55
Gm17535J3KMR8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Gm17535J3KMR8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm17535J3KMR8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Gm17535J3KMR8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Gm17535J3KMR8 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gm17535J3KMR8 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm17535J3KMR8 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Gm17535J3KMR8 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Gm17535J3KMR8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm17535J3KMR8 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm17535J3KMR8 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm17535J3KMR8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm17535J3KMR8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Gm17535J3KMR8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm17535J3KMR8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm17535J3KMR8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm17535J3KMR8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm17535J3KMR8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm17535J3KMR8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm17535J3KMR8 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.5■□□□□ 0.55
Gm17535J3KMR8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.5■□□□□ 0.55
Gm17535J3KMR8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm17535J3KMR8 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm17535J3KMR8 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Gm17535J3KMR8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.5■□□□□ 0.55
Gm17535J3KMR8 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Gm17535J3KMR8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm17535J3KMR8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm17535J3KMR8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm17535J3KMR8 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm17535J3KMR8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm17535J3KMR8 Gm8969-201ENSMUST00000199694 526 ntBASIC18.49■□□□□ 0.55
Gm17535J3KMR8 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Gm17535J3KMR8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Gm17535J3KMR8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm17535J3KMR8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Gm17535J3KMR8 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.49■□□□□ 0.55
Gm17535J3KMR8 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Gm17535J3KMR8 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm17535J3KMR8 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.48■□□□□ 0.55
Gm17535J3KMR8 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.48■□□□□ 0.55
Gm17535J3KMR8 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm17535J3KMR8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm17535J3KMR8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms