Protein–RNA interactions for Protein: G3X9F6

Sh3tc1, SH3 domain and tetratricopeptide repeats 1, mousemouse

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc1G3X9F6 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3tc1G3X9F6 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3tc1G3X9F6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Sh3tc1G3X9F6 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3tc1G3X9F6 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Sh3tc1G3X9F6 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC21.09■□□□□ 0.97
Sh3tc1G3X9F6 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3tc1G3X9F6 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3tc1G3X9F6 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Sh3tc1G3X9F6 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC21.08■□□□□ 0.97
Sh3tc1G3X9F6 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Sh3tc1G3X9F6 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Sh3tc1G3X9F6 Gm27742-201ENSMUST00000184667 60 ntBASIC21.08■□□□□ 0.97
Sh3tc1G3X9F6 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sh3tc1G3X9F6 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sh3tc1G3X9F6 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.08■□□□□ 0.96
Sh3tc1G3X9F6 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sh3tc1G3X9F6 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Sh3tc1G3X9F6 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sh3tc1G3X9F6 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sh3tc1G3X9F6 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Sh3tc1G3X9F6 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sh3tc1G3X9F6 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Sh3tc1G3X9F6 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Sh3tc1G3X9F6 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC21.07■□□□□ 0.96
Sh3tc1G3X9F6 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
Sh3tc1G3X9F6 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sh3tc1G3X9F6 Gm43272-201ENSMUST00000200599 1584 ntBASIC21.07■□□□□ 0.96
Sh3tc1G3X9F6 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sh3tc1G3X9F6 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC21.07■□□□□ 0.96
Sh3tc1G3X9F6 Fst-202ENSMUST00000223640 2612 ntBASIC21.07■□□□□ 0.96
Sh3tc1G3X9F6 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Sh3tc1G3X9F6 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sh3tc1G3X9F6 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sh3tc1G3X9F6 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sh3tc1G3X9F6 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sh3tc1G3X9F6 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sh3tc1G3X9F6 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Sh3tc1G3X9F6 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3tc1G3X9F6 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Sh3tc1G3X9F6 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC21.06■□□□□ 0.96
Sh3tc1G3X9F6 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3tc1G3X9F6 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3tc1G3X9F6 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3tc1G3X9F6 Gm19721-201ENSMUST00000195284 1764 ntBASIC21.06■□□□□ 0.96
Sh3tc1G3X9F6 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3tc1G3X9F6 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3tc1G3X9F6 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3tc1G3X9F6 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC21.06■□□□□ 0.96
Sh3tc1G3X9F6 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3tc1G3X9F6 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sh3tc1G3X9F6 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC21.05■□□□□ 0.96
Sh3tc1G3X9F6 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC21.05■□□□□ 0.96
Sh3tc1G3X9F6 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sh3tc1G3X9F6 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sh3tc1G3X9F6 AC154855.1-201ENSMUST00000227353 1458 ntBASIC21.05■□□□□ 0.96
Sh3tc1G3X9F6 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sh3tc1G3X9F6 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sh3tc1G3X9F6 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC21.05■□□□□ 0.96
Sh3tc1G3X9F6 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Sh3tc1G3X9F6 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sh3tc1G3X9F6 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.05■□□□□ 0.96
Sh3tc1G3X9F6 Dapk1-207ENSMUST00000226059 5009 ntBASIC21.05■□□□□ 0.96
Sh3tc1G3X9F6 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sh3tc1G3X9F6 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
Sh3tc1G3X9F6 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Sh3tc1G3X9F6 Gm45328-201ENSMUST00000210942 917 ntBASIC21.04■□□□□ 0.96
Sh3tc1G3X9F6 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3tc1G3X9F6 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3tc1G3X9F6 Cxcl14-202ENSMUST00000224801 1467 ntBASIC21.04■□□□□ 0.96
Sh3tc1G3X9F6 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3tc1G3X9F6 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3tc1G3X9F6 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.04■□□□□ 0.96
Sh3tc1G3X9F6 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3tc1G3X9F6 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3tc1G3X9F6 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3tc1G3X9F6 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3tc1G3X9F6 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3tc1G3X9F6 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3tc1G3X9F6 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Sh3tc1G3X9F6 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Sh3tc1G3X9F6 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3tc1G3X9F6 AC122351.1-201ENSMUST00000220467 126 ntBASIC21.04■□□□□ 0.96
Sh3tc1G3X9F6 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3tc1G3X9F6 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3tc1G3X9F6 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3tc1G3X9F6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3tc1G3X9F6 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3tc1G3X9F6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3tc1G3X9F6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3tc1G3X9F6 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3tc1G3X9F6 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Sh3tc1G3X9F6 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3tc1G3X9F6 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3tc1G3X9F6 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC21.03■□□□□ 0.96
Sh3tc1G3X9F6 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sh3tc1G3X9F6 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sh3tc1G3X9F6 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
Sh3tc1G3X9F6 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sh3tc1G3X9F6 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms