Protein–RNA interactions for Protein: F6R3J9

Gm8879, Predicted gene 8879, mousemouse

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm8879F6R3J9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm8879F6R3J9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm8879F6R3J9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm8879F6R3J9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm8879F6R3J9 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm8879F6R3J9 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm8879F6R3J9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm8879F6R3J9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm8879F6R3J9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm8879F6R3J9 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.68■□□□□ 0.26
Gm8879F6R3J9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm8879F6R3J9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm8879F6R3J9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm8879F6R3J9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Gm8879F6R3J9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gm8879F6R3J9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.67■□□□□ 0.26
Gm8879F6R3J9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm8879F6R3J9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm8879F6R3J9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm8879F6R3J9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.67■□□□□ 0.26
Gm8879F6R3J9 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.67■□□□□ 0.26
Gm8879F6R3J9 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.67■□□□□ 0.26
Gm8879F6R3J9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm8879F6R3J9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm8879F6R3J9 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm8879F6R3J9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm8879F6R3J9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm8879F6R3J9 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm8879F6R3J9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Gm8879F6R3J9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Gm8879F6R3J9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.66■□□□□ 0.26
Gm8879F6R3J9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Gm8879F6R3J9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Gm8879F6R3J9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.66■□□□□ 0.26
Gm8879F6R3J9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm8879F6R3J9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm8879F6R3J9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm8879F6R3J9 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Gm8879F6R3J9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm8879F6R3J9 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm8879F6R3J9 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Gm8879F6R3J9 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.65■□□□□ 0.26
Gm8879F6R3J9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Gm8879F6R3J9 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm8879F6R3J9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm8879F6R3J9 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm8879F6R3J9 Gm42642-201ENSMUST00000200683 355 ntBASIC16.65■□□□□ 0.26
Gm8879F6R3J9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.65■□□□□ 0.26
Gm8879F6R3J9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Gm8879F6R3J9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.65■□□□□ 0.26
Gm8879F6R3J9 Gm29791-202ENSMUST00000207888 369 ntBASIC16.65■□□□□ 0.26
Gm8879F6R3J9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.65■□□□□ 0.26
Gm8879F6R3J9 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm8879F6R3J9 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm8879F6R3J9 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm8879F6R3J9 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm8879F6R3J9 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.65■□□□□ 0.26
Gm8879F6R3J9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm8879F6R3J9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm8879F6R3J9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm8879F6R3J9 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm8879F6R3J9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm8879F6R3J9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm8879F6R3J9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm8879F6R3J9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm8879F6R3J9 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gm8879F6R3J9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm8879F6R3J9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm8879F6R3J9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gm8879F6R3J9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gm8879F6R3J9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm8879F6R3J9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.64■□□□□ 0.25
Gm8879F6R3J9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm8879F6R3J9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm8879F6R3J9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm8879F6R3J9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.64■□□□□ 0.25
Gm8879F6R3J9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm8879F6R3J9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.64■□□□□ 0.25
Gm8879F6R3J9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm8879F6R3J9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm8879F6R3J9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm8879F6R3J9 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.64■□□□□ 0.25
Gm8879F6R3J9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm8879F6R3J9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.63■□□□□ 0.25
Gm8879F6R3J9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Gm8879F6R3J9 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Gm8879F6R3J9 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm8879F6R3J9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.63■□□□□ 0.25
Gm8879F6R3J9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm8879F6R3J9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Gm8879F6R3J9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm8879F6R3J9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm8879F6R3J9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm8879F6R3J9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm8879F6R3J9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm8879F6R3J9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.63■□□□□ 0.25
Gm8879F6R3J9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.63■□□□□ 0.25
Gm8879F6R3J9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.63■□□□□ 0.25
Gm8879F6R3J9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.63■□□□□ 0.25
Gm8879F6R3J9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms