Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC20.98■□□□□ 0.95
Ube4aE9Q735 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.98■□□□□ 0.95
Ube4aE9Q735 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ube4aE9Q735 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ube4aE9Q735 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ube4aE9Q735 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ube4aE9Q735 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ube4aE9Q735 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ube4aE9Q735 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Ube4aE9Q735 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ube4aE9Q735 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Ube4aE9Q735 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ube4aE9Q735 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.97■□□□□ 0.95
Ube4aE9Q735 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ube4aE9Q735 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ube4aE9Q735 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Ube4aE9Q735 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.97■□□□□ 0.95
Ube4aE9Q735 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ube4aE9Q735 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.97■□□□□ 0.95
Ube4aE9Q735 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.97■□□□□ 0.95
Ube4aE9Q735 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ube4aE9Q735 Gm27704-201ENSMUST00000185094 107 ntBASIC20.97■□□□□ 0.95
Ube4aE9Q735 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ube4aE9Q735 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ube4aE9Q735 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ube4aE9Q735 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ube4aE9Q735 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ube4aE9Q735 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Ube4aE9Q735 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ube4aE9Q735 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Ube4aE9Q735 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ube4aE9Q735 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ube4aE9Q735 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ube4aE9Q735 Gm9103-201ENSMUST00000119371 405 ntBASIC20.96■□□□□ 0.95
Ube4aE9Q735 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.96■□□□□ 0.95
Ube4aE9Q735 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Ube4aE9Q735 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ube4aE9Q735 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ube4aE9Q735 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ube4aE9Q735 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ube4aE9Q735 AC154855.1-201ENSMUST00000227353 1458 ntBASIC20.95■□□□□ 0.94
Ube4aE9Q735 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ube4aE9Q735 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ube4aE9Q735 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ube4aE9Q735 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC20.95■□□□□ 0.94
Ube4aE9Q735 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Ube4aE9Q735 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ube4aE9Q735 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ube4aE9Q735 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ube4aE9Q735 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ube4aE9Q735 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Ube4aE9Q735 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ube4aE9Q735 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.95■□□□□ 0.94
Ube4aE9Q735 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ube4aE9Q735 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ube4aE9Q735 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ube4aE9Q735 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ube4aE9Q735 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ube4aE9Q735 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ube4aE9Q735 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Ube4aE9Q735 Gm17808-201ENSMUST00000200859 894 ntBASIC20.94■□□□□ 0.94
Ube4aE9Q735 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC20.94■□□□□ 0.94
Ube4aE9Q735 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC20.94■□□□□ 0.94
Ube4aE9Q735 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ube4aE9Q735 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ube4aE9Q735 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ube4aE9Q735 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ube4aE9Q735 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.94■□□□□ 0.94
Ube4aE9Q735 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ube4aE9Q735 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ube4aE9Q735 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ube4aE9Q735 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ube4aE9Q735 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ube4aE9Q735 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ube4aE9Q735 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Ube4aE9Q735 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.93■□□□□ 0.94
Ube4aE9Q735 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ube4aE9Q735 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ube4aE9Q735 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ube4aE9Q735 Iqck-206ENSMUST00000208658 2891 ntBASIC20.93■□□□□ 0.94
Ube4aE9Q735 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ube4aE9Q735 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ube4aE9Q735 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Ube4aE9Q735 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ube4aE9Q735 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ube4aE9Q735 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ube4aE9Q735 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ube4aE9Q735 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ube4aE9Q735 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ube4aE9Q735 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ube4aE9Q735 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ube4aE9Q735 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ube4aE9Q735 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ube4aE9Q735 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ube4aE9Q735 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ube4aE9Q735 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Ube4aE9Q735 Gm18958-201ENSMUST00000174258 762 ntBASIC20.91■□□□□ 0.94
Ube4aE9Q735 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.91■□□□□ 0.94
Ube4aE9Q735 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Ube4aE9Q735 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms