Protein–RNA interactions for Protein: E9Q5K9

Ythdc1, YTH domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ythdc1E9Q5K9 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Ythdc1E9Q5K9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC21.28■■□□□ 1
Ythdc1E9Q5K9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ythdc1E9Q5K9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
Ythdc1E9Q5K9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ythdc1E9Q5K9 Gm10698-201ENSMUST00000182663 604 ntBASIC21.28■■□□□ 1
Ythdc1E9Q5K9 Mir6982-201ENSMUST00000184354 68 ntBASIC21.28■■□□□ 1
Ythdc1E9Q5K9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC21.28■■□□□ 1
Ythdc1E9Q5K9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ythdc1E9Q5K9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC21.28■■□□□ 1
Ythdc1E9Q5K9 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ythdc1E9Q5K9 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ythdc1E9Q5K9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ythdc1E9Q5K9 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ythdc1E9Q5K9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ythdc1E9Q5K9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Ythdc1E9Q5K9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC21.28■■□□□ 1
Ythdc1E9Q5K9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ythdc1E9Q5K9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ythdc1E9Q5K9 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ythdc1E9Q5K9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Ythdc1E9Q5K9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ythdc1E9Q5K9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Ythdc1E9Q5K9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC21.27■■□□□ 1
Ythdc1E9Q5K9 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC21.27■■□□□ 1
Ythdc1E9Q5K9 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ythdc1E9Q5K9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ythdc1E9Q5K9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ythdc1E9Q5K9 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Ythdc1E9Q5K9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ythdc1E9Q5K9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.26■□□□□ 0.99
Ythdc1E9Q5K9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ythdc1E9Q5K9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Ythdc1E9Q5K9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.26■□□□□ 0.99
Ythdc1E9Q5K9 H2-K2-201ENSMUST00000174250 1049 ntBASIC21.26■□□□□ 0.99
Ythdc1E9Q5K9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC21.26■□□□□ 0.99
Ythdc1E9Q5K9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ythdc1E9Q5K9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ythdc1E9Q5K9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ythdc1E9Q5K9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ythdc1E9Q5K9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ythdc1E9Q5K9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ythdc1E9Q5K9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ythdc1E9Q5K9 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ythdc1E9Q5K9 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ythdc1E9Q5K9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ythdc1E9Q5K9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ythdc1E9Q5K9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ythdc1E9Q5K9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ythdc1E9Q5K9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ythdc1E9Q5K9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ythdc1E9Q5K9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ythdc1E9Q5K9 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Ythdc1E9Q5K9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ythdc1E9Q5K9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ythdc1E9Q5K9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ythdc1E9Q5K9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ythdc1E9Q5K9 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ythdc1E9Q5K9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Ythdc1E9Q5K9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.25■□□□□ 0.99
Ythdc1E9Q5K9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ythdc1E9Q5K9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ythdc1E9Q5K9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ythdc1E9Q5K9 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ythdc1E9Q5K9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ythdc1E9Q5K9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ythdc1E9Q5K9 Gm15378-201ENSMUST00000121894 207 ntBASIC21.24■□□□□ 0.99
Ythdc1E9Q5K9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ythdc1E9Q5K9 Zfp783-201ENSMUST00000095946 670 ntBASIC21.24■□□□□ 0.99
Ythdc1E9Q5K9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.24■□□□□ 0.99
Ythdc1E9Q5K9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ythdc1E9Q5K9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC21.24■□□□□ 0.99
Ythdc1E9Q5K9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Ythdc1E9Q5K9 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC21.24■□□□□ 0.99
Ythdc1E9Q5K9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ythdc1E9Q5K9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ythdc1E9Q5K9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
Ythdc1E9Q5K9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ythdc1E9Q5K9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ythdc1E9Q5K9 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ythdc1E9Q5K9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Ythdc1E9Q5K9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC21.23■□□□□ 0.99
Ythdc1E9Q5K9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ythdc1E9Q5K9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ythdc1E9Q5K9 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.23■□□□□ 0.99
Ythdc1E9Q5K9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ythdc1E9Q5K9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ythdc1E9Q5K9 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ythdc1E9Q5K9 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ythdc1E9Q5K9 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Ythdc1E9Q5K9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ythdc1E9Q5K9 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ythdc1E9Q5K9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.22■□□□□ 0.99
Ythdc1E9Q5K9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC21.22■□□□□ 0.99
Ythdc1E9Q5K9 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ythdc1E9Q5K9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ythdc1E9Q5K9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Ythdc1E9Q5K9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ythdc1E9Q5K9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ythdc1E9Q5K9 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms