Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Herc1E9PZP8 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Herc1E9PZP8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC9.84□□□□□ -0.83
Herc1E9PZP8 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Herc1E9PZP8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Herc1E9PZP8 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Herc1E9PZP8 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Herc1E9PZP8 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Herc1E9PZP8 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Herc1E9PZP8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Herc1E9PZP8 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Herc1E9PZP8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Herc1E9PZP8 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Herc1E9PZP8 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Herc1E9PZP8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Herc1E9PZP8 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Herc1E9PZP8 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC9.83□□□□□ -0.84
Herc1E9PZP8 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Herc1E9PZP8 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Herc1E9PZP8 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Herc1E9PZP8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Herc1E9PZP8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Herc1E9PZP8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Herc1E9PZP8 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC9.83□□□□□ -0.84
Herc1E9PZP8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Herc1E9PZP8 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC9.83□□□□□ -0.84
Herc1E9PZP8 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Herc1E9PZP8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC9.83□□□□□ -0.84
Herc1E9PZP8 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Herc1E9PZP8 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC9.83□□□□□ -0.84
Herc1E9PZP8 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Herc1E9PZP8 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Herc1E9PZP8 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Herc1E9PZP8 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Herc1E9PZP8 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Herc1E9PZP8 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC9.83□□□□□ -0.84
Herc1E9PZP8 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Herc1E9PZP8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Herc1E9PZP8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Herc1E9PZP8 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Herc1E9PZP8 CT009713.7-201ENSMUST00000224689 571 ntBASIC9.82□□□□□ -0.84
Herc1E9PZP8 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Herc1E9PZP8 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Herc1E9PZP8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Herc1E9PZP8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Herc1E9PZP8 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Herc1E9PZP8 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Herc1E9PZP8 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC9.82□□□□□ -0.84
Herc1E9PZP8 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC9.82□□□□□ -0.84
Herc1E9PZP8 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC9.82□□□□□ -0.84
Herc1E9PZP8 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC9.82□□□□□ -0.84
Herc1E9PZP8 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Herc1E9PZP8 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC9.82□□□□□ -0.84
Herc1E9PZP8 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Herc1E9PZP8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Herc1E9PZP8 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Herc1E9PZP8 Gm6550-201ENSMUST00000187574 993 ntBASIC9.82□□□□□ -0.84
Herc1E9PZP8 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Herc1E9PZP8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Herc1E9PZP8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Herc1E9PZP8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Herc1E9PZP8 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Herc1E9PZP8 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Herc1E9PZP8 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC9.82□□□□□ -0.84
Herc1E9PZP8 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Herc1E9PZP8 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Herc1E9PZP8 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Herc1E9PZP8 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Herc1E9PZP8 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC9.81□□□□□ -0.84
Herc1E9PZP8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Herc1E9PZP8 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Herc1E9PZP8 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Herc1E9PZP8 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC9.81□□□□□ -0.84
Herc1E9PZP8 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Herc1E9PZP8 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Herc1E9PZP8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Herc1E9PZP8 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Herc1E9PZP8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Herc1E9PZP8 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Herc1E9PZP8 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Herc1E9PZP8 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Herc1E9PZP8 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Herc1E9PZP8 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Herc1E9PZP8 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Herc1E9PZP8 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Herc1E9PZP8 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Herc1E9PZP8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Herc1E9PZP8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Herc1E9PZP8 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Herc1E9PZP8 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Herc1E9PZP8 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Herc1E9PZP8 Gm6184-201ENSMUST00000120403 1261 ntBASIC9.81□□□□□ -0.84
Herc1E9PZP8 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC9.81□□□□□ -0.84
Herc1E9PZP8 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Herc1E9PZP8 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Herc1E9PZP8 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Herc1E9PZP8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Herc1E9PZP8 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC9.81□□□□□ -0.84
Herc1E9PZP8 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC9.81□□□□□ -0.84
Herc1E9PZP8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms