Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rrn3B2RS91 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Rrn3B2RS91 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rrn3B2RS91 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rrn3B2RS91 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Rrn3B2RS91 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rrn3B2RS91 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rrn3B2RS91 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.51■□□□□ 0.39
Rrn3B2RS91 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rrn3B2RS91 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.51■□□□□ 0.39
Rrn3B2RS91 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rrn3B2RS91 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rrn3B2RS91 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Rrn3B2RS91 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.51■□□□□ 0.39
Rrn3B2RS91 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Rrn3B2RS91 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Rrn3B2RS91 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.51■□□□□ 0.39
Rrn3B2RS91 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.51■□□□□ 0.39
Rrn3B2RS91 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rrn3B2RS91 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rrn3B2RS91 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rrn3B2RS91 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rrn3B2RS91 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rrn3B2RS91 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rrn3B2RS91 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rrn3B2RS91 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rrn3B2RS91 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.5■□□□□ 0.39
Rrn3B2RS91 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rrn3B2RS91 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rrn3B2RS91 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.5■□□□□ 0.39
Rrn3B2RS91 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.5■□□□□ 0.39
Rrn3B2RS91 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rrn3B2RS91 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.5■□□□□ 0.39
Rrn3B2RS91 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rrn3B2RS91 Gm10252-201ENSMUST00000209541 832 ntBASIC17.5■□□□□ 0.39
Rrn3B2RS91 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.5■□□□□ 0.39
Rrn3B2RS91 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.5■□□□□ 0.39
Rrn3B2RS91 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rrn3B2RS91 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rrn3B2RS91 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rrn3B2RS91 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rrn3B2RS91 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rrn3B2RS91 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rrn3B2RS91 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.5■□□□□ 0.39
Rrn3B2RS91 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rrn3B2RS91 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.49■□□□□ 0.39
Rrn3B2RS91 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rrn3B2RS91 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rrn3B2RS91 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rrn3B2RS91 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rrn3B2RS91 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rrn3B2RS91 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rrn3B2RS91 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rrn3B2RS91 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rrn3B2RS91 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Rrn3B2RS91 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rrn3B2RS91 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Rrn3B2RS91 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.49■□□□□ 0.39
Rrn3B2RS91 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rrn3B2RS91 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.49■□□□□ 0.39
Rrn3B2RS91 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.49■□□□□ 0.39
Rrn3B2RS91 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Rrn3B2RS91 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rrn3B2RS91 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.49■□□□□ 0.39
Rrn3B2RS91 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.49■□□□□ 0.39
Rrn3B2RS91 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rrn3B2RS91 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rrn3B2RS91 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rrn3B2RS91 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rrn3B2RS91 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rrn3B2RS91 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rrn3B2RS91 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rrn3B2RS91 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rrn3B2RS91 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Rrn3B2RS91 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.48■□□□□ 0.39
Rrn3B2RS91 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rrn3B2RS91 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Rrn3B2RS91 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.48■□□□□ 0.39
Rrn3B2RS91 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rrn3B2RS91 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Rrn3B2RS91 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rrn3B2RS91 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Rrn3B2RS91 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rrn3B2RS91 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rrn3B2RS91 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Rrn3B2RS91 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.48■□□□□ 0.39
Rrn3B2RS91 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rrn3B2RS91 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rrn3B2RS91 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rrn3B2RS91 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rrn3B2RS91 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rrn3B2RS91 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rrn3B2RS91 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Rrn3B2RS91 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Rrn3B2RS91 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.47■□□□□ 0.39
Rrn3B2RS91 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rrn3B2RS91 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Rrn3B2RS91 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rrn3B2RS91 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rrn3B2RS91 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms