Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC21.17■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.17■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC21.17■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC21.17■□□□□ 0.98
Atg4a-psA0A0G2JFS9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atg4a-psA0A0G2JFS9 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Gm16499-203ENSMUST00000204633 2177 ntBASIC21.17■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC21.16■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Atg4a-psA0A0G2JFS9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Atg4a-psA0A0G2JFS9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC21.16■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atg4a-psA0A0G2JFS9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Atg4a-psA0A0G2JFS9 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC21.16■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC21.16■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Atg4a-psA0A0G2JFS9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Atg4a-psA0A0G2JFS9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC21.15■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC21.15■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atg4a-psA0A0G2JFS9 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
Atg4a-psA0A0G2JFS9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Atg4a-psA0A0G2JFS9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC21.14■□□□□ 0.97
Atg4a-psA0A0G2JFS9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.14■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC21.13■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC21.13■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Otx2os1-204ENSMUST00000227221 751 ntBASIC21.13■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.12■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Mir5122-201ENSMUST00000175004 89 ntBASIC21.12■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Gm38027-201ENSMUST00000192315 235 ntBASIC21.12■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC21.12■□□□□ 0.97
Atg4a-psA0A0G2JFS9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Atg4a-psA0A0G2JFS9 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms