Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Gm7638-201ENSMUST00000121348 967 ntBASIC15.37■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.37■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Gm9731-201ENSMUST00000209480 747 ntBASIC15.37■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Il3ra-202ENSMUST00000223589 738 ntBASIC15.37■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.37■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.36■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.36■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.36■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv12-1A0A0B4J1H0 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.36■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.35■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv12-1A0A0B4J1H0 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trbv12-1A0A0B4J1H0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv12-1A0A0B4J1H0 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.35■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.35■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv12-1A0A0B4J1H0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv12-1A0A0B4J1H0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.34■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.34■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.34■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.34■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.34■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trbv12-1A0A0B4J1H0 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.33■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trbv12-1A0A0B4J1H0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv12-1A0A0B4J1H0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms