Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC11.79□□□□□ -0.52
Trav3-4A0A075B654 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav3-4A0A075B654 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-4A0A075B654 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-4A0A075B654 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-4A0A075B654 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-4A0A075B654 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-4A0A075B654 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-4A0A075B654 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-4A0A075B654 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Trav3-4A0A075B654 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-4A0A075B654 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-4A0A075B654 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-4A0A075B654 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav3-4A0A075B654 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav3-4A0A075B654 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav3-4A0A075B654 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-4A0A075B654 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-4A0A075B654 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Trav3-4A0A075B654 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-4A0A075B654 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-4A0A075B654 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Trav3-4A0A075B654 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Trav3-4A0A075B654 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-4A0A075B654 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-4A0A075B654 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC11.78□□□□□ -0.52
Trav3-4A0A075B654 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-4A0A075B654 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Trav3-4A0A075B654 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-4A0A075B654 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav3-4A0A075B654 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-4A0A075B654 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC11.78□□□□□ -0.52
Trav3-4A0A075B654 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-4A0A075B654 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav3-4A0A075B654 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav3-4A0A075B654 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-4A0A075B654 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Trav3-4A0A075B654 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-4A0A075B654 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav3-4A0A075B654 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav3-4A0A075B654 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav3-4A0A075B654 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav3-4A0A075B654 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav3-4A0A075B654 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav3-4A0A075B654 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav3-4A0A075B654 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav3-4A0A075B654 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav3-4A0A075B654 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav3-4A0A075B654 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav3-4A0A075B654 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav3-4A0A075B654 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3-4A0A075B654 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3-4A0A075B654 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3-4A0A075B654 Gm10232-201ENSMUST00000089221 720 ntBASIC11.77□□□□□ -0.53
Trav3-4A0A075B654 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav3-4A0A075B654 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3-4A0A075B654 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3-4A0A075B654 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav3-4A0A075B654 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3-4A0A075B654 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3-4A0A075B654 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3-4A0A075B654 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3-4A0A075B654 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3-4A0A075B654 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3-4A0A075B654 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav3-4A0A075B654 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3-4A0A075B654 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3-4A0A075B654 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Trav3-4A0A075B654 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3-4A0A075B654 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav3-4A0A075B654 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3-4A0A075B654 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav3-4A0A075B654 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-4A0A075B654 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-4A0A075B654 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trav3-4A0A075B654 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav3-4A0A075B654 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-4A0A075B654 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-4A0A075B654 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-4A0A075B654 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav3-4A0A075B654 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-4A0A075B654 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-4A0A075B654 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-4A0A075B654 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-4A0A075B654 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav3-4A0A075B654 Gm37166-201ENSMUST00000195473 2474 ntBASIC11.76□□□□□ -0.53
Trav3-4A0A075B654 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-4A0A075B654 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-4A0A075B654 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-4A0A075B654 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-4A0A075B654 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Trav3-4A0A075B654 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-4A0A075B654 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC11.76□□□□□ -0.53
Trav3-4A0A075B654 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Trav3-4A0A075B654 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-4A0A075B654 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-4A0A075B654 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-4A0A075B654 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-4A0A075B654 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav3-4A0A075B654 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms