Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
H2afb3S4R1G7 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
H2afb3S4R1G7 Gm29293-201ENSMUST00000189416 2188 ntBASIC4.33□□□□□ -1.72
H2afb3S4R1G7 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
H2afb3S4R1G7 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
H2afb3S4R1G7 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
H2afb3S4R1G7 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
H2afb3S4R1G7 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Gm15916-201ENSMUST00000118355 736 ntBASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Gm14785-201ENSMUST00000120185 539 ntBASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Gm13132-201ENSMUST00000121194 472 ntBASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Gm12893-201ENSMUST00000121732 275 ntBASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Gm16259-201ENSMUST00000145241 553 ntBASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Gm25667-201ENSMUST00000157701 275 ntBASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Gm22383-201ENSMUST00000158188 327 ntBASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Gm24675-201ENSMUST00000158757 259 ntBASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC4.32□□□□□ -1.72
H2afb3S4R1G7 S100a11-ps-201ENSMUST00000181735 306 ntBASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Mir6416-201ENSMUST00000183664 117 ntBASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Mir6238-201ENSMUST00000184140 129 ntBASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Gm27492-201ENSMUST00000185194 187 ntBASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Gm37828-201ENSMUST00000192496 432 ntBASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Gm43304-201ENSMUST00000196803 326 ntBASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Igkv12-40-201ENSMUST00000199208 347 ntBASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Gm43925-201ENSMUST00000203498 206 ntBASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Gm8774-201ENSMUST00000203621 692 ntBASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC4.32□□□□□ -1.72
H2afb3S4R1G7 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC4.32□□□□□ -1.72
H2afb3S4R1G7 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC4.32□□□□□ -1.72
H2afb3S4R1G7 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC4.32□□□□□ -1.72
H2afb3S4R1G7 AC161884.2-201ENSMUST00000224513 227 ntBASIC4.32□□□□□ -1.72
H2afb3S4R1G7 AL589742.1-201ENSMUST00000226034 349 ntBASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
H2afb3S4R1G7 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC4.31□□□□□ -1.72
H2afb3S4R1G7 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
H2afb3S4R1G7 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
H2afb3S4R1G7 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
H2afb3S4R1G7 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
H2afb3S4R1G7 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
H2afb3S4R1G7 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
H2afb3S4R1G7 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC4.31□□□□□ -1.72
H2afb3S4R1G7 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
H2afb3S4R1G7 Gm24230-201ENSMUST00000104313 129 ntBASIC4.31□□□□□ -1.72
H2afb3S4R1G7 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC4.31□□□□□ -1.72
H2afb3S4R1G7 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC4.31□□□□□ -1.72
H2afb3S4R1G7 Gm11550-201ENSMUST00000118210 699 ntBASIC4.31□□□□□ -1.72
H2afb3S4R1G7 Gm4853-201ENSMUST00000119359 394 ntBASIC4.31□□□□□ -1.72
H2afb3S4R1G7 Gm14521-201ENSMUST00000119545 350 ntBASIC4.31□□□□□ -1.72
H2afb3S4R1G7 Gm12368-201ENSMUST00000122251 434 ntBASIC4.31□□□□□ -1.72
H2afb3S4R1G7 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC4.31□□□□□ -1.72
H2afb3S4R1G7 Gm25559-201ENSMUST00000157182 74 ntBASIC4.31□□□□□ -1.72
H2afb3S4R1G7 Gm23591-201ENSMUST00000157663 286 ntBASIC4.31□□□□□ -1.72
H2afb3S4R1G7 Gm25553-201ENSMUST00000158076 79 ntBASIC4.31□□□□□ -1.72
H2afb3S4R1G7 Gm22733-201ENSMUST00000158094 91 ntBASIC4.31□□□□□ -1.72
H2afb3S4R1G7 Gm25660-201ENSMUST00000158470 104 ntBASIC4.31□□□□□ -1.72
H2afb3S4R1G7 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
H2afb3S4R1G7 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC4.31□□□□□ -1.72
H2afb3S4R1G7 Gm20401-201ENSMUST00000173717 212 ntBASIC4.31□□□□□ -1.72
H2afb3S4R1G7 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC4.31□□□□□ -1.72
H2afb3S4R1G7 Mir5101-201ENSMUST00000175181 83 ntBASIC4.31□□□□□ -1.72
H2afb3S4R1G7 Gm27036-201ENSMUST00000182465 980 ntBASIC4.31□□□□□ -1.72
H2afb3S4R1G7 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
H2afb3S4R1G7 Gm20832-201ENSMUST00000189076 665 ntBASIC4.31□□□□□ -1.72
H2afb3S4R1G7 Gm28389-201ENSMUST00000190090 697 ntBASIC4.31□□□□□ -1.72
H2afb3S4R1G7 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
H2afb3S4R1G7 Gm10292-202ENSMUST00000193165 585 ntBASIC4.31□□□□□ -1.72
H2afb3S4R1G7 Gm20770-201ENSMUST00000193474 694 ntBASIC4.31□□□□□ -1.72
H2afb3S4R1G7 Gm38109-201ENSMUST00000195386 181 ntBASIC4.31□□□□□ -1.72
H2afb3S4R1G7 Gm30638-201ENSMUST00000195570 656 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 94.8 ms