Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm43039-201ENSMUST00000202883 963 ntBASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 Gm39147-201ENSMUST00000211376 465 ntBASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 Gm37211-201ENSMUST00000193392 3433 ntBASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 Gm11896-201ENSMUST00000121105 820 ntBASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 Gm14383-201ENSMUST00000121637 386 ntBASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 Gm18867-201ENSMUST00000198022 1179 ntBASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 Gm44118-201ENSMUST00000204665 229 ntBASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 Gm8319-201ENSMUST00000205708 641 ntBASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 Gm45080-201ENSMUST00000206648 283 ntBASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 Gm18672-201ENSMUST00000208035 270 ntBASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 Gm34005-201ENSMUST00000215834 282 ntBASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 Gm17820-201ENSMUST00000220213 1068 ntBASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 AC158142.1-201ENSMUST00000226721 416 ntBASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Scn8aQ9WTU3 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
Scn8aQ9WTU3 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Scn8aQ9WTU3 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Scn8aQ9WTU3 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Scn8aQ9WTU3 Gm38240-201ENSMUST00000195110 2487 ntBASIC3.61□□□□□ -1.83
Scn8aQ9WTU3 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.61□□□□□ -1.83
Scn8aQ9WTU3 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Scn8aQ9WTU3 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.61□□□□□ -1.83
Scn8aQ9WTU3 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Scn8aQ9WTU3 Mir290a-201ENSMUST00000104627 83 ntBASIC3.61□□□□□ -1.83
Scn8aQ9WTU3 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC3.61□□□□□ -1.83
Scn8aQ9WTU3 Gm15142-201ENSMUST00000121013 856 ntBASIC3.61□□□□□ -1.83
Scn8aQ9WTU3 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.61□□□□□ -1.83
Scn8aQ9WTU3 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Scn8aQ9WTU3 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Scn8aQ9WTU3 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Scn8aQ9WTU3 Gm29576-201ENSMUST00000188020 678 ntBASIC3.61□□□□□ -1.83
Scn8aQ9WTU3 Gm28354-201ENSMUST00000190904 678 ntBASIC3.61□□□□□ -1.83
Scn8aQ9WTU3 Gm38330-201ENSMUST00000192743 959 ntBASIC3.61□□□□□ -1.83
Scn8aQ9WTU3 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Scn8aQ9WTU3 Gm44513-201ENSMUST00000206811 439 ntBASIC3.61□□□□□ -1.83
Scn8aQ9WTU3 Gm44887-201ENSMUST00000208980 178 ntBASIC3.61□□□□□ -1.83
Scn8aQ9WTU3 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC3.61□□□□□ -1.83
Scn8aQ9WTU3 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC3.61□□□□□ -1.83
Scn8aQ9WTU3 Gm23925-201ENSMUST00000082471 132 ntBASIC3.61□□□□□ -1.83
Scn8aQ9WTU3 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Scn8aQ9WTU3 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Scn8aQ9WTU3 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Scn8aQ9WTU3 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 Gm44682-201ENSMUST00000208501 2614 ntBASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 Gm25272-201ENSMUST00000104293 128 ntBASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 Gm14775-201ENSMUST00000122089 310 ntBASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 Gm28030-201ENSMUST00000184987 138 ntBASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 Gm28920-201ENSMUST00000189957 699 ntBASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 Gm44611-201ENSMUST00000207507 355 ntBASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 Gm44927-201ENSMUST00000207573 716 ntBASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 Gm17989-201ENSMUST00000211543 412 ntBASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 AC124489.2-201ENSMUST00000223930 589 ntBASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 Gm18913-201ENSMUST00000204311 1789 ntBASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 Gm11923-201ENSMUST00000118135 508 ntBASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 Gm25967-201ENSMUST00000157168 147 ntBASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 Gm24537-201ENSMUST00000157950 102 ntBASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 Gm16101-201ENSMUST00000160695 430 ntBASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 Gm8600-201ENSMUST00000186320 905 ntBASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 AC155167.1-201ENSMUST00000228931 614 ntBASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC3.6□□□□□ -1.83
Scn8aQ9WTU3 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Scn8aQ9WTU3 Gm37999-201ENSMUST00000195178 1809 ntBASIC3.59□□□□□ -1.83
Scn8aQ9WTU3 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC3.59□□□□□ -1.83
Scn8aQ9WTU3 Gm43658-201ENSMUST00000202348 4176 ntBASIC3.59□□□□□ -1.83
Scn8aQ9WTU3 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Scn8aQ9WTU3 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms