Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 CT030166.1-201ENSMUST00000222654 357 ntBASIC3.86□□□□□ -1.79
Trim3Q9R1R2 AC117949.2-201ENSMUST00000225900 584 ntBASIC3.86□□□□□ -1.79
Trim3Q9R1R2 AC154738.2-201ENSMUST00000227403 1110 ntBASIC3.86□□□□□ -1.79
Trim3Q9R1R2 Olfr844-201ENSMUST00000054106 930 ntBASIC3.86□□□□□ -1.79
Trim3Q9R1R2 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Trim3Q9R1R2 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Trim3Q9R1R2 Gm25800-201ENSMUST00000082636 134 ntBASIC3.86□□□□□ -1.79
Trim3Q9R1R2 Gm23455-201ENSMUST00000083331 100 ntBASIC3.86□□□□□ -1.79
Trim3Q9R1R2 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Trim3Q9R1R2 AC124586.1-201ENSMUST00000221673 2795 ntBASIC3.86□□□□□ -1.79
Trim3Q9R1R2 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Trim3Q9R1R2 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Trim3Q9R1R2 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Trim3Q9R1R2 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Trim3Q9R1R2 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Trim3Q9R1R2 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Trim3Q9R1R2 Gm42728-201ENSMUST00000202644 1552 ntBASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Igkv11-106-201ENSMUST00000103331 346 ntBASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Gm25537-201ENSMUST00000103851 109 ntBASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Gm23481-201ENSMUST00000104173 131 ntBASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Gm22493-201ENSMUST00000104494 132 ntBASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Gm14365-201ENSMUST00000117535 587 ntBASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Gm13607-201ENSMUST00000117875 539 ntBASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Gm14905-201ENSMUST00000122351 639 ntBASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Gm22613-201ENSMUST00000122679 292 ntBASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Gm16373-201ENSMUST00000129517 303 ntBASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Trim3Q9R1R2 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Gm22156-201ENSMUST00000158409 141 ntBASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Mir1264-201ENSMUST00000175381 86 ntBASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Gm8807-201ENSMUST00000179328 492 ntBASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Gm21070-201ENSMUST00000182425 985 ntBASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Gm29513-201ENSMUST00000185741 202 ntBASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Gm29634-201ENSMUST00000188467 696 ntBASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Gm28191-201ENSMUST00000189112 211 ntBASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Gm28699-201ENSMUST00000189193 696 ntBASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Gm37300-201ENSMUST00000193327 280 ntBASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Gm21006-201ENSMUST00000196930 667 ntBASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Gm43730-201ENSMUST00000199863 372 ntBASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Gm8132-201ENSMUST00000204938 640 ntBASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Gm44852-201ENSMUST00000207950 369 ntBASIC3.85□□□□□ -1.79
Trim3Q9R1R2 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC3.85□□□□□ -1.79
Trim3Q9R1R2 AC131677.1-201ENSMUST00000218721 535 ntBASIC3.85□□□□□ -1.79
Trim3Q9R1R2 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC3.85□□□□□ -1.79
Trim3Q9R1R2 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.85□□□□□ -1.79
Trim3Q9R1R2 AC160756.1-201ENSMUST00000227266 235 ntBASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Gm24144-201ENSMUST00000082632 111 ntBASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Gm37006-201ENSMUST00000195253 2674 ntBASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Trim3Q9R1R2 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Gm5347-201ENSMUST00000210542 2327 ntBASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Gm44434-201ENSMUST00000203918 3745 ntBASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Trim3Q9R1R2 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Amd-ps1-201ENSMUST00000120127 994 ntBASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Gm14986-201ENSMUST00000121262 1002 ntBASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Gm11797-201ENSMUST00000121336 754 ntBASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Gm12313-201ENSMUST00000121347 421 ntBASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Gm12340-201ENSMUST00000121617 462 ntBASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Gm5123-201ENSMUST00000121905 837 ntBASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Gm5755-201ENSMUST00000152394 837 ntBASIC3.84□□□□□ -1.79
Trim3Q9R1R2 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Trim3Q9R1R2 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Gm26460-201ENSMUST00000175061 126 ntBASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Mir5134-201ENSMUST00000175529 78 ntBASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Gm22111-201ENSMUST00000178010 79 ntBASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Gm23687-201ENSMUST00000178664 79 ntBASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Gm24566-201ENSMUST00000179286 79 ntBASIC3.84□□□□□ -1.79
Trim3Q9R1R2 Gm23305-201ENSMUST00000179342 79 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 117.3 ms