Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Nubp1Q9R060 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC5.87□□□□□ -1.47
Nubp1Q9R060 Gm18796-201ENSMUST00000190440 1767 ntBASIC5.87□□□□□ -1.47
Nubp1Q9R060 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nubp1Q9R060 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Nubp1Q9R060 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
Nubp1Q9R060 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nubp1Q9R060 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nubp1Q9R060 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nubp1Q9R060 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nubp1Q9R060 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Nubp1Q9R060 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
Nubp1Q9R060 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nubp1Q9R060 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nubp1Q9R060 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Nubp1Q9R060 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Nubp1Q9R060 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nubp1Q9R060 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC5.87□□□□□ -1.47
Nubp1Q9R060 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC5.87□□□□□ -1.47
Nubp1Q9R060 Gm38284-201ENSMUST00000194803 4539 ntBASIC5.86□□□□□ -1.47
Nubp1Q9R060 Gm44231-201ENSMUST00000204106 4075 ntBASIC5.86□□□□□ -1.47
Nubp1Q9R060 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nubp1Q9R060 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
Nubp1Q9R060 Gm28874-201ENSMUST00000190917 3134 ntBASIC5.86□□□□□ -1.47
Nubp1Q9R060 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Nubp1Q9R060 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Nubp1Q9R060 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC5.86□□□□□ -1.47
Nubp1Q9R060 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Nubp1Q9R060 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC5.86□□□□□ -1.47
Nubp1Q9R060 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nubp1Q9R060 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Nubp1Q9R060 Gm5832-201ENSMUST00000121704 1582 ntBASIC5.86□□□□□ -1.47
Nubp1Q9R060 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nubp1Q9R060 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC5.86□□□□□ -1.47
Nubp1Q9R060 Mir881-201ENSMUST00000104844 78 ntBASIC5.86□□□□□ -1.47
Nubp1Q9R060 Gm12568-201ENSMUST00000117362 624 ntBASIC5.86□□□□□ -1.47
Nubp1Q9R060 Gm12721-201ENSMUST00000120621 268 ntBASIC5.86□□□□□ -1.47
Nubp1Q9R060 Gm25486-201ENSMUST00000158726 63 ntBASIC5.86□□□□□ -1.47
Nubp1Q9R060 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC5.86□□□□□ -1.47
Nubp1Q9R060 Gm23968-201ENSMUST00000175047 125 ntBASIC5.86□□□□□ -1.47
Nubp1Q9R060 Gm16378-201ENSMUST00000179168 342 ntBASIC5.86□□□□□ -1.47
Nubp1Q9R060 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Nubp1Q9R060 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5.86□□□□□ -1.47
Nubp1Q9R060 Gm29062-201ENSMUST00000186032 694 ntBASIC5.86□□□□□ -1.47
Nubp1Q9R060 Gm28534-201ENSMUST00000187744 676 ntBASIC5.86□□□□□ -1.47
Nubp1Q9R060 Gm37135-201ENSMUST00000192652 534 ntBASIC5.86□□□□□ -1.47
Nubp1Q9R060 Gm32340-201ENSMUST00000192883 259 ntBASIC5.86□□□□□ -1.47
Nubp1Q9R060 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC5.86□□□□□ -1.47
Nubp1Q9R060 Gm18467-201ENSMUST00000208805 434 ntBASIC5.86□□□□□ -1.47
Nubp1Q9R060 Gm45772-201ENSMUST00000212961 240 ntBASIC5.86□□□□□ -1.47
Nubp1Q9R060 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC5.86□□□□□ -1.47
Nubp1Q9R060 Gm18904-201ENSMUST00000218756 329 ntBASIC5.86□□□□□ -1.47
Nubp1Q9R060 Gm4012-201ENSMUST00000221504 581 ntBASIC5.86□□□□□ -1.47
Nubp1Q9R060 Gm36758-201ENSMUST00000222594 310 ntBASIC5.86□□□□□ -1.47
Nubp1Q9R060 AC241593.1-201ENSMUST00000224768 397 ntBASIC5.86□□□□□ -1.47
Nubp1Q9R060 AL669819.1-201ENSMUST00000225143 330 ntBASIC5.86□□□□□ -1.47
Nubp1Q9R060 Gm2840-201ENSMUST00000048361 411 ntBASIC5.86□□□□□ -1.47
Nubp1Q9R060 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nubp1Q9R060 Gm5341-201ENSMUST00000058881 489 ntBASIC5.86□□□□□ -1.47
Nubp1Q9R060 Gm5265-201ENSMUST00000076828 342 ntBASIC5.86□□□□□ -1.47
Nubp1Q9R060 Gm25587-201ENSMUST00000082498 166 ntBASIC5.86□□□□□ -1.47
Nubp1Q9R060 n-R5s97-201ENSMUST00000082585 113 ntBASIC5.86□□□□□ -1.47
Nubp1Q9R060 Gm24924-201ENSMUST00000084007 164 ntBASIC5.86□□□□□ -1.47
Nubp1Q9R060 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
Nubp1Q9R060 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Nubp1Q9R060 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Nubp1Q9R060 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nubp1Q9R060 Gm44229-201ENSMUST00000203211 2487 ntBASIC5.86□□□□□ -1.47
Nubp1Q9R060 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC5.86□□□□□ -1.47
Nubp1Q9R060 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nubp1Q9R060 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nubp1Q9R060 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nubp1Q9R060 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Nubp1Q9R060 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Nubp1Q9R060 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Nubp1Q9R060 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC5.85□□□□□ -1.47
Nubp1Q9R060 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Nubp1Q9R060 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Nubp1Q9R060 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Nubp1Q9R060 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Nubp1Q9R060 Gm21036-201ENSMUST00000207544 2611 ntBASIC5.85□□□□□ -1.47
Nubp1Q9R060 Gm6866-201ENSMUST00000188559 2549 ntBASIC5.85□□□□□ -1.47
Nubp1Q9R060 AC152981.1-201ENSMUST00000218320 2480 ntBASIC5.85□□□□□ -1.47
Nubp1Q9R060 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Nubp1Q9R060 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Nubp1Q9R060 Gm43260-201ENSMUST00000197378 2430 ntBASIC5.85□□□□□ -1.47
Nubp1Q9R060 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Nubp1Q9R060 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Nubp1Q9R060 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Nubp1Q9R060 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Nubp1Q9R060 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
Nubp1Q9R060 Gm11429-201ENSMUST00000119089 144 ntBASIC5.85□□□□□ -1.47
Nubp1Q9R060 Gm14202-201ENSMUST00000120121 311 ntBASIC5.85□□□□□ -1.47
Nubp1Q9R060 Gm13578-201ENSMUST00000120849 590 ntBASIC5.85□□□□□ -1.47
Nubp1Q9R060 Gm15300-201ENSMUST00000122324 279 ntBASIC5.85□□□□□ -1.47
Nubp1Q9R060 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Nubp1Q9R060 Gm5353-201ENSMUST00000139800 793 ntBASIC5.85□□□□□ -1.47
Nubp1Q9R060 Gm23000-201ENSMUST00000157083 139 ntBASIC5.85□□□□□ -1.47
Nubp1Q9R060 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Nubp1Q9R060 Gm17366-201ENSMUST00000167629 187 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms