Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm3307-201ENSMUST00000176164 632 ntBASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm27551-201ENSMUST00000184258 77 ntBASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC3.65□□□□□ -1.83
Trem1Q9JKE2 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm3933-201ENSMUST00000195391 439 ntBASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Igkv4-56-201ENSMUST00000198436 349 ntBASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm45610-201ENSMUST00000209227 784 ntBASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 AC132384.9-201ENSMUST00000218085 277 ntBASIC3.65□□□□□ -1.83
Trem1Q9JKE2 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm23975-201ENSMUST00000082685 106 ntBASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Mir133b-201ENSMUST00000083546 119 ntBASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm21379-201ENSMUST00000179772 1955 ntBASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Gm14142-201ENSMUST00000117833 296 ntBASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Gm15916-201ENSMUST00000118355 736 ntBASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Gm13122-201ENSMUST00000118380 453 ntBASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Gm13228-201ENSMUST00000118937 634 ntBASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Gm13815-201ENSMUST00000119963 412 ntBASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Gm11876-201ENSMUST00000120002 269 ntBASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Gm12650-201ENSMUST00000121966 258 ntBASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Gm16359-201ENSMUST00000124511 289 ntBASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC3.64□□□□□ -1.83
Trem1Q9JKE2 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Gm24251-201ENSMUST00000157324 114 ntBASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Mir3080-201ENSMUST00000175010 79 ntBASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Gm23450-201ENSMUST00000178285 91 ntBASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Gm27960-201ENSMUST00000183445 184 ntBASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Gm28467-201ENSMUST00000190981 318 ntBASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Gm43350-201ENSMUST00000196382 711 ntBASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Gm42919-201ENSMUST00000197753 1284 ntBASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Gm6240-201ENSMUST00000208014 473 ntBASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Gm40692-201ENSMUST00000220411 491 ntBASIC3.64□□□□□ -1.83
Trem1Q9JKE2 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC3.64□□□□□ -1.83
Trem1Q9JKE2 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Trem1Q9JKE2 Prl7a1-203ENSMUST00000224852 1283 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms