Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm18747-201ENSMUST00000198129 648 ntBASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Gm43405-201ENSMUST00000198642 337 ntBASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC3.7□□□□□ -1.82
Cdc40Q9DC48 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Cdc40Q9DC48 AL669916.5-201ENSMUST00000214874 361 ntBASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Cdc40Q9DC48 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Gm18441-201ENSMUST00000223539 617 ntBASIC3.7□□□□□ -1.82
Cdc40Q9DC48 AC133517.1-202ENSMUST00000224409 233 ntBASIC3.7□□□□□ -1.82
Cdc40Q9DC48 AC166095.1-203ENSMUST00000224591 233 ntBASIC3.7□□□□□ -1.82
Cdc40Q9DC48 AC154838.1-201ENSMUST00000228944 911 ntBASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Gm9597-202ENSMUST00000227632 1387 ntBASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Cdc40Q9DC48 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Mir1193-201ENSMUST00000116761 121 ntBASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Gm15933-201ENSMUST00000117215 616 ntBASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Gm15021-201ENSMUST00000117832 742 ntBASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Gm11393-201ENSMUST00000118019 288 ntBASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Gm15263-201ENSMUST00000121556 642 ntBASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Gm11931-201ENSMUST00000121630 447 ntBASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Gm26320-201ENSMUST00000157742 306 ntBASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Gm6486-201ENSMUST00000166202 434 ntBASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Gm20526-201ENSMUST00000173416 158 ntBASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Gm29563-201ENSMUST00000187249 496 ntBASIC3.69□□□□□ -1.82
Cdc40Q9DC48 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Gm28396-201ENSMUST00000190309 379 ntBASIC3.69□□□□□ -1.82
Cdc40Q9DC48 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Gm38061-201ENSMUST00000192490 365 ntBASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Gm8035-201ENSMUST00000204625 687 ntBASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Gm45796-201ENSMUST00000212483 114 ntBASIC3.69□□□□□ -1.82
Cdc40Q9DC48 AL672194.1-201ENSMUST00000224841 603 ntBASIC3.69□□□□□ -1.82
Cdc40Q9DC48 CT030254.3-201ENSMUST00000225959 1231 ntBASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Gm23455-201ENSMUST00000083331 100 ntBASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Gm3623-201ENSMUST00000173643 2747 ntBASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Gm21033-201ENSMUST00000208590 2608 ntBASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Gm9343-201ENSMUST00000209016 2609 ntBASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Gm37936-201ENSMUST00000194647 1322 ntBASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Cdc40Q9DC48 AC153522.2-201ENSMUST00000218389 3853 ntBASIC3.69□□□□□ -1.82
Cdc40Q9DC48 Gm38069-201ENSMUST00000195360 2144 ntBASIC3.68□□□□□ -1.82
Cdc40Q9DC48 Gm13230-201ENSMUST00000120870 1575 ntBASIC3.68□□□□□ -1.82
Cdc40Q9DC48 Gm25169-201ENSMUST00000104190 129 ntBASIC3.68□□□□□ -1.82
Cdc40Q9DC48 Gm24281-201ENSMUST00000104234 136 ntBASIC3.68□□□□□ -1.82
Cdc40Q9DC48 Gm14605-201ENSMUST00000120599 268 ntBASIC3.68□□□□□ -1.82
Cdc40Q9DC48 Klra11-ps-201ENSMUST00000122033 810 ntBASIC3.68□□□□□ -1.82
Cdc40Q9DC48 Gm14473-201ENSMUST00000122269 557 ntBASIC3.68□□□□□ -1.82
Cdc40Q9DC48 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC3.68□□□□□ -1.82
Cdc40Q9DC48 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC3.68□□□□□ -1.82
Cdc40Q9DC48 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC3.68□□□□□ -1.82
Cdc40Q9DC48 Gm24998-201ENSMUST00000157908 89 ntBASIC3.68□□□□□ -1.82
Cdc40Q9DC48 Gm23782-201ENSMUST00000157939 120 ntBASIC3.68□□□□□ -1.82
Cdc40Q9DC48 Gm26171-201ENSMUST00000158422 131 ntBASIC3.68□□□□□ -1.82
Cdc40Q9DC48 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Cdc40Q9DC48 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC3.68□□□□□ -1.82
Cdc40Q9DC48 Gm8807-201ENSMUST00000179328 492 ntBASIC3.68□□□□□ -1.82
Cdc40Q9DC48 Gm27952-201ENSMUST00000184748 105 ntBASIC3.68□□□□□ -1.82
Cdc40Q9DC48 Gm36964-201ENSMUST00000191876 198 ntBASIC3.68□□□□□ -1.82
Cdc40Q9DC48 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC3.68□□□□□ -1.82
Cdc40Q9DC48 Gm42451-201ENSMUST00000197410 244 ntBASIC3.68□□□□□ -1.82
Cdc40Q9DC48 Gm43424-201ENSMUST00000200484 253 ntBASIC3.68□□□□□ -1.82
Cdc40Q9DC48 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC3.68□□□□□ -1.82
Cdc40Q9DC48 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC3.68□□□□□ -1.82
Cdc40Q9DC48 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Cdc40Q9DC48 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.68□□□□□ -1.82
Cdc40Q9DC48 AC102815.1-201ENSMUST00000226662 1061 ntBASIC3.68□□□□□ -1.82
Cdc40Q9DC48 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Cdc40Q9DC48 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Cdc40Q9DC48 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Cdc40Q9DC48 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.68□□□□□ -1.82
Cdc40Q9DC48 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Cdc40Q9DC48 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Cdc40Q9DC48 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Cdc40Q9DC48 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Cdc40Q9DC48 Gm42486-201ENSMUST00000200369 3486 ntBASIC3.68□□□□□ -1.82
Cdc40Q9DC48 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.68□□□□□ -1.82
Cdc40Q9DC48 Gm12586-201ENSMUST00000117328 1316 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms