Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC3.74□□□□□ -1.81
Ccdc3Q9D6Y1 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Ccdc3Q9D6Y1 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Ccdc3Q9D6Y1 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Ccdc3Q9D6Y1 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Ccdc3Q9D6Y1 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Ccdc3Q9D6Y1 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Ccdc3Q9D6Y1 Gm5347-201ENSMUST00000210542 2327 ntBASIC3.73□□□□□ -1.81
Ccdc3Q9D6Y1 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Ccdc3Q9D6Y1 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Ccdc3Q9D6Y1 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Ccdc3Q9D6Y1 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Ccdc3Q9D6Y1 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.73□□□□□ -1.81
Ccdc3Q9D6Y1 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Ccdc3Q9D6Y1 Gm23063-201ENSMUST00000102350 93 ntBASIC3.73□□□□□ -1.81
Ccdc3Q9D6Y1 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
Ccdc3Q9D6Y1 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC3.73□□□□□ -1.81
Ccdc3Q9D6Y1 Gm11566-201ENSMUST00000118550 203 ntBASIC3.73□□□□□ -1.81
Ccdc3Q9D6Y1 Gm13677-201ENSMUST00000120739 595 ntBASIC3.73□□□□□ -1.81
Ccdc3Q9D6Y1 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.73□□□□□ -1.81
Ccdc3Q9D6Y1 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.73□□□□□ -1.81
Ccdc3Q9D6Y1 Gm22531-201ENSMUST00000158819 140 ntBASIC3.73□□□□□ -1.81
Ccdc3Q9D6Y1 Gm2862-201ENSMUST00000161524 328 ntBASIC3.73□□□□□ -1.81
Ccdc3Q9D6Y1 Mir6374-201ENSMUST00000184003 107 ntBASIC3.73□□□□□ -1.81
Ccdc3Q9D6Y1 Gm27392-201ENSMUST00000185041 101 ntBASIC3.73□□□□□ -1.81
Ccdc3Q9D6Y1 Gm37343-201ENSMUST00000192542 111 ntBASIC3.73□□□□□ -1.81
Ccdc3Q9D6Y1 Gm2314-201ENSMUST00000200391 586 ntBASIC3.73□□□□□ -1.81
Ccdc3Q9D6Y1 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Ccdc3Q9D6Y1 Gm8748-201ENSMUST00000211125 587 ntBASIC3.73□□□□□ -1.81
Ccdc3Q9D6Y1 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Ccdc3Q9D6Y1 Gm7119-201ENSMUST00000221345 695 ntBASIC3.73□□□□□ -1.81
Ccdc3Q9D6Y1 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.73□□□□□ -1.81
Ccdc3Q9D6Y1 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC3.73□□□□□ -1.81
Ccdc3Q9D6Y1 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Ccdc3Q9D6Y1 Gm26226-201ENSMUST00000082509 116 ntBASIC3.73□□□□□ -1.81
Ccdc3Q9D6Y1 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Ccdc3Q9D6Y1 Gm37527-201ENSMUST00000192406 3547 ntBASIC3.73□□□□□ -1.81
Ccdc3Q9D6Y1 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Ccdc3Q9D6Y1 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Ccdc3Q9D6Y1 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Ccdc3Q9D6Y1 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Ccdc3Q9D6Y1 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC3.73□□□□□ -1.81
Ccdc3Q9D6Y1 Gm37999-201ENSMUST00000195178 1809 ntBASIC3.72□□□□□ -1.81
Ccdc3Q9D6Y1 Gm43320-201ENSMUST00000196047 2916 ntBASIC3.72□□□□□ -1.81
Ccdc3Q9D6Y1 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Ccdc3Q9D6Y1 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc3Q9D6Y1 Gm24127-201ENSMUST00000104110 130 ntBASIC3.72□□□□□ -1.81
Ccdc3Q9D6Y1 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC3.72□□□□□ -1.81
Ccdc3Q9D6Y1 Gm14816-201ENSMUST00000117174 294 ntBASIC3.72□□□□□ -1.81
Ccdc3Q9D6Y1 Gm14788-201ENSMUST00000119457 375 ntBASIC3.72□□□□□ -1.81
Ccdc3Q9D6Y1 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc3Q9D6Y1 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.72□□□□□ -1.81
Ccdc3Q9D6Y1 Gm24730-201ENSMUST00000158228 117 ntBASIC3.72□□□□□ -1.81
Ccdc3Q9D6Y1 Gm22158-201ENSMUST00000158411 126 ntBASIC3.72□□□□□ -1.81
Ccdc3Q9D6Y1 Gm23198-201ENSMUST00000158811 91 ntBASIC3.72□□□□□ -1.81
Ccdc3Q9D6Y1 Gm2389-201ENSMUST00000160487 189 ntBASIC3.72□□□□□ -1.81
Ccdc3Q9D6Y1 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ccdc3Q9D6Y1 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.72□□□□□ -1.81
Ccdc3Q9D6Y1 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc3Q9D6Y1 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC3.72□□□□□ -1.81
Ccdc3Q9D6Y1 Mir6938-201ENSMUST00000184173 63 ntBASIC3.72□□□□□ -1.81
Ccdc3Q9D6Y1 Gm43371-201ENSMUST00000202838 1031 ntBASIC3.72□□□□□ -1.81
Ccdc3Q9D6Y1 Gm45317-201ENSMUST00000210385 223 ntBASIC3.72□□□□□ -1.81
Ccdc3Q9D6Y1 Gm3690-201ENSMUST00000211341 262 ntBASIC3.72□□□□□ -1.81
Ccdc3Q9D6Y1 AC129323.1-201ENSMUST00000216733 470 ntBASIC3.72□□□□□ -1.81
Ccdc3Q9D6Y1 AC154634.3-201ENSMUST00000224589 736 ntBASIC3.72□□□□□ -1.81
Ccdc3Q9D6Y1 AC141884.1-201ENSMUST00000226327 636 ntBASIC3.72□□□□□ -1.81
Ccdc3Q9D6Y1 Gm12582-201ENSMUST00000030555 697 ntBASIC3.72□□□□□ -1.81
Ccdc3Q9D6Y1 Gm24147-201ENSMUST00000082763 144 ntBASIC3.72□□□□□ -1.81
Ccdc3Q9D6Y1 Gm23677-201ENSMUST00000083156 104 ntBASIC3.72□□□□□ -1.81
Ccdc3Q9D6Y1 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Ccdc3Q9D6Y1 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
Ccdc3Q9D6Y1 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ccdc3Q9D6Y1 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC3.72□□□□□ -1.81
Ccdc3Q9D6Y1 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc3Q9D6Y1 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ccdc3Q9D6Y1 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ccdc3Q9D6Y1 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.71□□□□□ -1.81
Ccdc3Q9D6Y1 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
Ccdc3Q9D6Y1 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Ccdc3Q9D6Y1 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Ccdc3Q9D6Y1 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Ccdc3Q9D6Y1 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Ccdc3Q9D6Y1 Gm26273-201ENSMUST00000104180 131 ntBASIC3.71□□□□□ -1.82
Ccdc3Q9D6Y1 Gm25272-201ENSMUST00000104293 128 ntBASIC3.71□□□□□ -1.82
Ccdc3Q9D6Y1 Gm15988-201ENSMUST00000118677 367 ntBASIC3.71□□□□□ -1.82
Ccdc3Q9D6Y1 Gm13831-201ENSMUST00000118764 302 ntBASIC3.71□□□□□ -1.82
Ccdc3Q9D6Y1 Gm15377-201ENSMUST00000119594 246 ntBASIC3.71□□□□□ -1.82
Ccdc3Q9D6Y1 Gm14687-201ENSMUST00000120206 363 ntBASIC3.71□□□□□ -1.82
Ccdc3Q9D6Y1 Gm12897-201ENSMUST00000120341 250 ntBASIC3.71□□□□□ -1.82
Ccdc3Q9D6Y1 Gm25105-201ENSMUST00000122477 130 ntBASIC3.71□□□□□ -1.82
Ccdc3Q9D6Y1 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC3.71□□□□□ -1.82
Ccdc3Q9D6Y1 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Ccdc3Q9D6Y1 Gm25966-201ENSMUST00000157169 117 ntBASIC3.71□□□□□ -1.82
Ccdc3Q9D6Y1 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Ccdc3Q9D6Y1 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Ccdc3Q9D6Y1 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Ccdc3Q9D6Y1 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Ccdc3Q9D6Y1 Gm27828-201ENSMUST00000184108 119 ntBASIC3.71□□□□□ -1.82
Ccdc3Q9D6Y1 Gm27189-201ENSMUST00000184119 190 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms