Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Mup-ps14-201ENSMUST00000118437 532 ntBASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Gm14607-201ENSMUST00000119119 491 ntBASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Gm6664-201ENSMUST00000119138 468 ntBASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Mup-ps10-201ENSMUST00000119626 556 ntBASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Gm14655-201ENSMUST00000120124 578 ntBASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC5.54□□□□□ -1.52
Stag1Q9D3E6 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Gm24289-201ENSMUST00000157629 135 ntBASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Gm24962-201ENSMUST00000157917 109 ntBASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Gm17085-201ENSMUST00000165425 502 ntBASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Gm5473-201ENSMUST00000179326 642 ntBASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Gm27428-201ENSMUST00000184289 110 ntBASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Gm6501-201ENSMUST00000187178 916 ntBASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Ighv1-79-201ENSMUST00000200152 350 ntBASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Gm43036-201ENSMUST00000200594 373 ntBASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Gm2522-201ENSMUST00000204280 322 ntBASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Gm44212-201ENSMUST00000205016 897 ntBASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Stag1Q9D3E6 AL606513.1-201ENSMUST00000225369 579 ntBASIC5.54□□□□□ -1.52
Stag1Q9D3E6 AL589742.1-201ENSMUST00000226034 349 ntBASIC5.54□□□□□ -1.52
Stag1Q9D3E6 AC113031.2-201ENSMUST00000226132 579 ntBASIC5.54□□□□□ -1.52
Stag1Q9D3E6 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Gm6462-201ENSMUST00000081488 304 ntBASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Gm23455-201ENSMUST00000083331 100 ntBASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Stag1Q9D3E6 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Stag1Q9D3E6 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Stag1Q9D3E6 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Stag1Q9D3E6 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Stag1Q9D3E6 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Stag1Q9D3E6 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Stag1Q9D3E6 Gm37696-201ENSMUST00000194223 3349 ntBASIC5.53□□□□□ -1.52
Stag1Q9D3E6 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC5.53□□□□□ -1.52
Stag1Q9D3E6 Gm42843-201ENSMUST00000196328 3616 ntBASIC5.53□□□□□ -1.52
Stag1Q9D3E6 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Stag1Q9D3E6 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Stag1Q9D3E6 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Stag1Q9D3E6 AC149588.1-201ENSMUST00000228274 3745 ntBASIC5.53□□□□□ -1.52
Stag1Q9D3E6 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Stag1Q9D3E6 Mir761-201ENSMUST00000103245 76 ntBASIC5.53□□□□□ -1.52
Stag1Q9D3E6 Gm14067-201ENSMUST00000119340 314 ntBASIC5.53□□□□□ -1.52
Stag1Q9D3E6 Gm12748-201ENSMUST00000120763 504 ntBASIC5.53□□□□□ -1.52
Stag1Q9D3E6 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Stag1Q9D3E6 Gm6182-201ENSMUST00000156439 1208 ntBASIC5.53□□□□□ -1.52
Stag1Q9D3E6 Gm22789-201ENSMUST00000157884 130 ntBASIC5.53□□□□□ -1.52
Stag1Q9D3E6 Mir6960-201ENSMUST00000183449 61 ntBASIC5.53□□□□□ -1.52
Stag1Q9D3E6 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC5.53□□□□□ -1.52
Stag1Q9D3E6 Gm5372-201ENSMUST00000187540 409 ntBASIC5.53□□□□□ -1.52
Stag1Q9D3E6 Gm28625-201ENSMUST00000188309 205 ntBASIC5.53□□□□□ -1.52
Stag1Q9D3E6 Gm37636-201ENSMUST00000193583 359 ntBASIC5.53□□□□□ -1.52
Stag1Q9D3E6 Gm9560-201ENSMUST00000205012 1201 ntBASIC5.53□□□□□ -1.52
Stag1Q9D3E6 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC5.53□□□□□ -1.52
Stag1Q9D3E6 Gm45171-201ENSMUST00000206360 736 ntBASIC5.53□□□□□ -1.52
Stag1Q9D3E6 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC5.53□□□□□ -1.52
Stag1Q9D3E6 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC5.53□□□□□ -1.52
Stag1Q9D3E6 Gm45658-201ENSMUST00000209197 580 ntBASIC5.53□□□□□ -1.52
Stag1Q9D3E6 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC5.53□□□□□ -1.52
Stag1Q9D3E6 Gm45499-201ENSMUST00000211656 280 ntBASIC5.53□□□□□ -1.52
Stag1Q9D3E6 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC5.53□□□□□ -1.52
Stag1Q9D3E6 AC156952.1-201ENSMUST00000220361 793 ntBASIC5.53□□□□□ -1.52
Stag1Q9D3E6 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Stag1Q9D3E6 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Stag1Q9D3E6 n-R5s160-201ENSMUST00000083096 120 ntBASIC5.53□□□□□ -1.52
Stag1Q9D3E6 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Stag1Q9D3E6 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Stag1Q9D3E6 AC162938.2-205ENSMUST00000217551 2828 ntBASIC5.53□□□□□ -1.52
Stag1Q9D3E6 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Stag1Q9D3E6 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Stag1Q9D3E6 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Stag1Q9D3E6 Gm45854-201ENSMUST00000211857 3488 ntBASIC5.53□□□□□ -1.52
Stag1Q9D3E6 Gm43594-201ENSMUST00000201153 3442 ntBASIC5.52□□□□□ -1.53
Stag1Q9D3E6 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Stag1Q9D3E6 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Stag1Q9D3E6 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms