Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm7485-201ENSMUST00000119502 1109 ntBASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Gm13059-201ENSMUST00000119881 398 ntBASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Gm22208-201ENSMUST00000122658 110 ntBASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Gm25295-201ENSMUST00000122794 306 ntBASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Gm25605-201ENSMUST00000158364 124 ntBASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Gm16285-201ENSMUST00000162999 347 ntBASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Vps28Q9D1C8 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Mir6943-201ENSMUST00000185186 66 ntBASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Gm43344-201ENSMUST00000198723 1229 ntBASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.5□□□□□ -1.69
Vps28Q9D1C8 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC4.5□□□□□ -1.69
Vps28Q9D1C8 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Vps28Q9D1C8 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.5□□□□□ -1.69
Vps28Q9D1C8 AC117949.2-201ENSMUST00000225900 584 ntBASIC4.5□□□□□ -1.69
Vps28Q9D1C8 AC132112.1-201ENSMUST00000226354 505 ntBASIC4.5□□□□□ -1.69
Vps28Q9D1C8 AC155314.1-201ENSMUST00000227624 508 ntBASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Gm6369-201ENSMUST00000069626 412 ntBASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Gm23875-201ENSMUST00000083711 318 ntBASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Gm43990-201ENSMUST00000203790 1691 ntBASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Vps28Q9D1C8 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Vps28Q9D1C8 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Gm16082-201ENSMUST00000115992 377 ntBASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Gm14365-201ENSMUST00000117535 587 ntBASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Gm15058-201ENSMUST00000117689 458 ntBASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Gm12571-201ENSMUST00000118132 243 ntBASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Gm12656-201ENSMUST00000118149 577 ntBASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Klra14-ps-201ENSMUST00000119532 802 ntBASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Llph-ps2-201ENSMUST00000122000 393 ntBASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Gm25109-201ENSMUST00000122474 114 ntBASIC4.49□□□□□ -1.69
Vps28Q9D1C8 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Gm20701-201ENSMUST00000176082 347 ntBASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Gm27964-201ENSMUST00000185195 62 ntBASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Gm28118-201ENSMUST00000185957 294 ntBASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Gm29013-201ENSMUST00000187431 237 ntBASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Gm28830-201ENSMUST00000188192 213 ntBASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Gm5252-201ENSMUST00000189030 909 ntBASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Gm38149-201ENSMUST00000191943 339 ntBASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Gm38281-201ENSMUST00000192301 315 ntBASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Gm37050-201ENSMUST00000193464 466 ntBASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Gm9632-201ENSMUST00000195934 643 ntBASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Gm44395-201ENSMUST00000197056 153 ntBASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Gm5876-201ENSMUST00000203735 243 ntBASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Gm44919-201ENSMUST00000208587 1073 ntBASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Gm45458-201ENSMUST00000209900 522 ntBASIC4.49□□□□□ -1.69
Vps28Q9D1C8 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Vps28Q9D1C8 AL669916.5-201ENSMUST00000214874 361 ntBASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Gm46138-201ENSMUST00000215294 426 ntBASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Gm5917-201ENSMUST00000217638 721 ntBASIC4.49□□□□□ -1.69
Vps28Q9D1C8 AC153526.4-201ENSMUST00000217713 379 ntBASIC4.49□□□□□ -1.69
Vps28Q9D1C8 AC140930.4-201ENSMUST00000220750 150 ntBASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Gm46369-201ENSMUST00000221577 401 ntBASIC4.49□□□□□ -1.69
Vps28Q9D1C8 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC4.49□□□□□ -1.69
Vps28Q9D1C8 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.49□□□□□ -1.69
Vps28Q9D1C8 CT030684.2-201ENSMUST00000228946 826 ntBASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Gm25699-201ENSMUST00000082896 167 ntBASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
Vps28Q9D1C8 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.49□□□□□ -1.69
Vps28Q9D1C8 Gm38032-201ENSMUST00000195052 1589 ntBASIC4.48□□□□□ -1.69
Vps28Q9D1C8 Gm42551-201ENSMUST00000197701 1573 ntBASIC4.48□□□□□ -1.69
Vps28Q9D1C8 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Vps28Q9D1C8 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms