Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Gm17030-201ENSMUST00000167016 393 ntBASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Gm17081-201ENSMUST00000167363 478 ntBASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Gm17044-201ENSMUST00000168549 828 ntBASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Mir5110-201ENSMUST00000175537 87 ntBASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Gm14527-201ENSMUST00000179300 639 ntBASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Gm27492-201ENSMUST00000185194 187 ntBASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Gm37817-201ENSMUST00000195276 434 ntBASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Gm42694-201ENSMUST00000196951 358 ntBASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Gm42458-201ENSMUST00000201914 369 ntBASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 AC153526.1-201ENSMUST00000219750 190 ntBASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Gm17820-201ENSMUST00000220213 1068 ntBASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 AC154426.1-201ENSMUST00000225614 1132 ntBASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 AC130823.2-201ENSMUST00000226169 290 ntBASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 AC133101.1-201ENSMUST00000226939 1199 ntBASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 AC155167.1-201ENSMUST00000228931 614 ntBASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Gm5215-201ENSMUST00000054380 405 ntBASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Mir188-201ENSMUST00000083464 68 ntBASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Gm24490-201ENSMUST00000083803 98 ntBASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Gm23516-201ENSMUST00000093728 107 ntBASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Zscan4a-201ENSMUST00000210573 2279 ntBASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Gm14421-201ENSMUST00000121755 1958 ntBASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Ddx56Q9D0R4 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Gm15624-203ENSMUST00000204811 3402 ntBASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Gm42616-201ENSMUST00000198989 4184 ntBASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Gm17132-201ENSMUST00000109542 1158 ntBASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Mir1188-201ENSMUST00000116756 120 ntBASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Gm14995-201ENSMUST00000117135 391 ntBASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Gm15087-201ENSMUST00000117465 1172 ntBASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Gm11822-201ENSMUST00000119177 415 ntBASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Gm14915-201ENSMUST00000120747 204 ntBASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Gm25824-201ENSMUST00000157092 121 ntBASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Gm23537-201ENSMUST00000157536 330 ntBASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Gm24537-201ENSMUST00000157950 102 ntBASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Gm25906-201ENSMUST00000158489 126 ntBASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Mir3110-201ENSMUST00000175053 80 ntBASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Gm5511-201ENSMUST00000189380 802 ntBASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Gm18036-201ENSMUST00000195256 272 ntBASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Gm44456-201ENSMUST00000196554 89 ntBASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Gm43116-201ENSMUST00000199789 195 ntBASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Gm18007-201ENSMUST00000205019 844 ntBASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 AC126690.1-201ENSMUST00000228898 397 ntBASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Gm24610-201ENSMUST00000083270 109 ntBASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Mir337-201ENSMUST00000083592 97 ntBASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Gm21033-201ENSMUST00000208590 2608 ntBASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Gm9343-201ENSMUST00000209016 2609 ntBASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 AC147639.2-202ENSMUST00000224834 1545 ntBASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Gm45211-201ENSMUST00000206208 2650 ntBASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Ddx56Q9D0R4 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Ddx56Q9D0R4 AC134917.1-201ENSMUST00000220517 1449 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms