Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Mir129b-201ENSMUST00000197461 65 ntBASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Gm43405-201ENSMUST00000198642 337 ntBASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Gm44002-201ENSMUST00000205134 594 ntBASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Smc1aQ9CU62 CT030242.2-201ENSMUST00000221588 148 ntBASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC4.57□□□□□ -1.68
Smc1aQ9CU62 AC154184.2-201ENSMUST00000225335 349 ntBASIC4.57□□□□□ -1.68
Smc1aQ9CU62 AC131747.1-201ENSMUST00000226159 793 ntBASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
Smc1aQ9CU62 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Smc1aQ9CU62 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Gm43374-201ENSMUST00000202498 2391 ntBASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Smc1aQ9CU62 AC120375.2-201ENSMUST00000226532 1853 ntBASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Smc1aQ9CU62 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Gm24715-201ENSMUST00000102377 95 ntBASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Gm24067-201ENSMUST00000104514 85 ntBASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Gm11874-201ENSMUST00000117437 130 ntBASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Gm13743-201ENSMUST00000121486 724 ntBASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Gm12340-201ENSMUST00000121617 462 ntBASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Gm11931-201ENSMUST00000121630 447 ntBASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Gm22453-201ENSMUST00000122801 318 ntBASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Gm16373-201ENSMUST00000129517 303 ntBASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC4.56□□□□□ -1.68
Smc1aQ9CU62 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Gm24503-201ENSMUST00000158454 135 ntBASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Gm23702-201ENSMUST00000158840 130 ntBASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Gm3191-201ENSMUST00000167139 346 ntBASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Gm17075-201ENSMUST00000171924 670 ntBASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.56□□□□□ -1.68
Smc1aQ9CU62 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC4.56□□□□□ -1.68
Smc1aQ9CU62 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Gm44032-201ENSMUST00000204841 166 ntBASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Gm44865-201ENSMUST00000207240 531 ntBASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC4.56□□□□□ -1.68
Smc1aQ9CU62 AL662807.1-201ENSMUST00000224183 126 ntBASIC4.56□□□□□ -1.68
Smc1aQ9CU62 AC154738.2-201ENSMUST00000227403 1110 ntBASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Smc1aQ9CU62 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Gm37211-201ENSMUST00000193392 3433 ntBASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Smc1aQ9CU62 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Gm8757-201ENSMUST00000119660 372 ntBASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Gm1866-201ENSMUST00000120701 477 ntBASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Gm15263-201ENSMUST00000121556 642 ntBASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Gm14589-201ENSMUST00000121640 727 ntBASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Gm5123-201ENSMUST00000121905 837 ntBASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Gm12226-201ENSMUST00000144172 876 ntBASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Gm5755-201ENSMUST00000152394 837 ntBASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Gm26187-201ENSMUST00000157693 101 ntBASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Gm25999-201ENSMUST00000175398 133 ntBASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Gm19200-201ENSMUST00000182579 1001 ntBASIC4.55□□□□□ -1.68
Smc1aQ9CU62 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Gm8498-201ENSMUST00000188227 974 ntBASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Gm29525-201ENSMUST00000189844 699 ntBASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Gm18303-201ENSMUST00000190055 1176 ntBASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Gm29523-201ENSMUST00000191415 699 ntBASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Gm45539-201ENSMUST00000210313 428 ntBASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Smc1aQ9CU62 AC140344.1-201ENSMUST00000223384 387 ntBASIC4.55□□□□□ -1.68
Smc1aQ9CU62 CT025536.1-201ENSMUST00000226744 844 ntBASIC4.55□□□□□ -1.68
Smc1aQ9CU62 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms