Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm28896-201ENSMUST00000188609 696 ntBASIC3.72□□□□□ -1.81
Use1Q9CQ56 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Use1Q9CQ56 Gm29545-201ENSMUST00000188878 694 ntBASIC3.72□□□□□ -1.81
Use1Q9CQ56 Gm29196-201ENSMUST00000189239 618 ntBASIC3.72□□□□□ -1.81
Use1Q9CQ56 Gm29339-201ENSMUST00000189613 696 ntBASIC3.72□□□□□ -1.81
Use1Q9CQ56 Gm28159-201ENSMUST00000190296 696 ntBASIC3.72□□□□□ -1.81
Use1Q9CQ56 Gm29366-201ENSMUST00000190481 699 ntBASIC3.72□□□□□ -1.81
Use1Q9CQ56 Gm29407-201ENSMUST00000191468 696 ntBASIC3.72□□□□□ -1.81
Use1Q9CQ56 Gm37293-201ENSMUST00000191658 295 ntBASIC3.72□□□□□ -1.81
Use1Q9CQ56 Gm37433-201ENSMUST00000192695 678 ntBASIC3.72□□□□□ -1.81
Use1Q9CQ56 Gm37441-201ENSMUST00000194430 678 ntBASIC3.72□□□□□ -1.81
Use1Q9CQ56 Gm38107-201ENSMUST00000194873 696 ntBASIC3.72□□□□□ -1.81
Use1Q9CQ56 Gm37836-201ENSMUST00000195875 175 ntBASIC3.72□□□□□ -1.81
Use1Q9CQ56 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
Use1Q9CQ56 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC3.72□□□□□ -1.81
Use1Q9CQ56 Fth-ps3-201ENSMUST00000210405 358 ntBASIC3.72□□□□□ -1.81
Use1Q9CQ56 Gm45690-201ENSMUST00000210775 246 ntBASIC3.72□□□□□ -1.81
Use1Q9CQ56 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.72□□□□□ -1.81
Use1Q9CQ56 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC3.72□□□□□ -1.81
Use1Q9CQ56 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.72□□□□□ -1.81
Use1Q9CQ56 CT030194.1-201ENSMUST00000225507 532 ntBASIC3.72□□□□□ -1.81
Use1Q9CQ56 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Use1Q9CQ56 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Use1Q9CQ56 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC3.72□□□□□ -1.81
Use1Q9CQ56 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.72□□□□□ -1.81
Use1Q9CQ56 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Use1Q9CQ56 Gm23099-201ENSMUST00000083454 139 ntBASIC3.72□□□□□ -1.81
Use1Q9CQ56 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC3.72□□□□□ -1.81
Use1Q9CQ56 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Use1Q9CQ56 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Use1Q9CQ56 Gm10811-201ENSMUST00000221985 2448 ntBASIC3.72□□□□□ -1.81
Use1Q9CQ56 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.71□□□□□ -1.81
Use1Q9CQ56 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
Use1Q9CQ56 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.81
Use1Q9CQ56 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Use1Q9CQ56 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Use1Q9CQ56 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Use1Q9CQ56 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
Use1Q9CQ56 Gm37802-201ENSMUST00000194998 2643 ntBASIC3.71□□□□□ -1.82
Use1Q9CQ56 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.71□□□□□ -1.82
Use1Q9CQ56 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
Use1Q9CQ56 Gm22778-201ENSMUST00000104090 128 ntBASIC3.71□□□□□ -1.82
Use1Q9CQ56 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Use1Q9CQ56 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Use1Q9CQ56 Gm13831-201ENSMUST00000118764 302 ntBASIC3.71□□□□□ -1.82
Use1Q9CQ56 Gm11625-201ENSMUST00000119535 296 ntBASIC3.71□□□□□ -1.82
Use1Q9CQ56 Gm13737-201ENSMUST00000119793 232 ntBASIC3.71□□□□□ -1.82
Use1Q9CQ56 Gm22988-201ENSMUST00000122759 144 ntBASIC3.71□□□□□ -1.82
Use1Q9CQ56 Gm16327-201ENSMUST00000137146 228 ntBASIC3.71□□□□□ -1.82
Use1Q9CQ56 Gm23231-201ENSMUST00000157299 104 ntBASIC3.71□□□□□ -1.82
Use1Q9CQ56 Gm26045-201ENSMUST00000157862 97 ntBASIC3.71□□□□□ -1.82
Use1Q9CQ56 Gm16558-201ENSMUST00000163015 532 ntBASIC3.71□□□□□ -1.82
Use1Q9CQ56 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC3.71□□□□□ -1.82
Use1Q9CQ56 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC3.71□□□□□ -1.82
Use1Q9CQ56 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
Use1Q9CQ56 Mir6410-201ENSMUST00000184204 104 ntBASIC3.71□□□□□ -1.82
Use1Q9CQ56 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Use1Q9CQ56 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Use1Q9CQ56 Gm37501-201ENSMUST00000192830 691 ntBASIC3.71□□□□□ -1.82
Use1Q9CQ56 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC3.71□□□□□ -1.82
Use1Q9CQ56 Gm45523-201ENSMUST00000210712 799 ntBASIC3.71□□□□□ -1.82
Use1Q9CQ56 Gm45574-201ENSMUST00000210921 331 ntBASIC3.71□□□□□ -1.82
Use1Q9CQ56 AC139638.1-201ENSMUST00000218027 364 ntBASIC3.71□□□□□ -1.82
Use1Q9CQ56 Gm46327-201ENSMUST00000218240 365 ntBASIC3.71□□□□□ -1.82
Use1Q9CQ56 CT025552.1-201ENSMUST00000224561 521 ntBASIC3.71□□□□□ -1.82
Use1Q9CQ56 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Use1Q9CQ56 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Use1Q9CQ56 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Use1Q9CQ56 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.71□□□□□ -1.82
Use1Q9CQ56 Olfr1160-201ENSMUST00000099839 960 ntBASIC3.71□□□□□ -1.82
Use1Q9CQ56 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Use1Q9CQ56 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Use1Q9CQ56 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Use1Q9CQ56 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Use1Q9CQ56 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.7□□□□□ -1.82
Use1Q9CQ56 AC163296.2-201ENSMUST00000220177 1315 ntBASIC3.7□□□□□ -1.82
Use1Q9CQ56 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.7□□□□□ -1.82
Use1Q9CQ56 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Use1Q9CQ56 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Use1Q9CQ56 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Use1Q9CQ56 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Use1Q9CQ56 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Use1Q9CQ56 Gm23256-201ENSMUST00000102235 110 ntBASIC3.7□□□□□ -1.82
Use1Q9CQ56 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Use1Q9CQ56 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC3.7□□□□□ -1.82
Use1Q9CQ56 Gm26140-201ENSMUST00000103807 110 ntBASIC3.7□□□□□ -1.82
Use1Q9CQ56 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.7□□□□□ -1.82
Use1Q9CQ56 Gm15001-201ENSMUST00000117657 795 ntBASIC3.7□□□□□ -1.82
Use1Q9CQ56 Gm13501-201ENSMUST00000118477 979 ntBASIC3.7□□□□□ -1.82
Use1Q9CQ56 Gm8244-201ENSMUST00000121254 264 ntBASIC3.7□□□□□ -1.82
Use1Q9CQ56 Gm15530-201ENSMUST00000122206 555 ntBASIC3.7□□□□□ -1.82
Use1Q9CQ56 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Use1Q9CQ56 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Use1Q9CQ56 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Use1Q9CQ56 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Use1Q9CQ56 Gm15508-201ENSMUST00000160330 325 ntBASIC3.7□□□□□ -1.82
Use1Q9CQ56 Gm22908-201ENSMUST00000177620 110 ntBASIC3.7□□□□□ -1.82
Use1Q9CQ56 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Use1Q9CQ56 Mir6971-201ENSMUST00000183497 63 ntBASIC3.7□□□□□ -1.82
Use1Q9CQ56 Gm27535-201ENSMUST00000183814 157 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms