Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Snord38a-201ENSMUST00000083746 71 ntBASIC6.14□□□□□ -1.43
Trim11Q99PQ2 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Trim11Q99PQ2 AC164297.6-201ENSMUST00000224643 1568 ntBASIC6.14□□□□□ -1.43
Trim11Q99PQ2 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Trim11Q99PQ2 Gm14390-201ENSMUST00000117505 1695 ntBASIC6.14□□□□□ -1.43
Trim11Q99PQ2 AC115910.1-201ENSMUST00000221188 4275 ntBASIC6.13□□□□□ -1.43
Trim11Q99PQ2 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Trim11Q99PQ2 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC6.13□□□□□ -1.43
Trim11Q99PQ2 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim11Q99PQ2 AC134596.1-201ENSMUST00000222016 1922 ntBASIC6.13□□□□□ -1.43
Trim11Q99PQ2 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim11Q99PQ2 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Trim11Q99PQ2 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Trim11Q99PQ2 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim11Q99PQ2 Gm24935-201ENSMUST00000103770 110 ntBASIC6.13□□□□□ -1.43
Trim11Q99PQ2 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC6.13□□□□□ -1.43
Trim11Q99PQ2 Gm14558-201ENSMUST00000117458 381 ntBASIC6.13□□□□□ -1.43
Trim11Q99PQ2 Gm11737-201ENSMUST00000118713 468 ntBASIC6.13□□□□□ -1.43
Trim11Q99PQ2 Gm13228-201ENSMUST00000118937 634 ntBASIC6.13□□□□□ -1.43
Trim11Q99PQ2 Gm13259-201ENSMUST00000120792 456 ntBASIC6.13□□□□□ -1.43
Trim11Q99PQ2 Gm22519-201ENSMUST00000158270 178 ntBASIC6.13□□□□□ -1.43
Trim11Q99PQ2 Gm16566-201ENSMUST00000160387 910 ntBASIC6.13□□□□□ -1.43
Trim11Q99PQ2 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC6.13□□□□□ -1.43
Trim11Q99PQ2 Ighv12-2-201ENSMUST00000191949 362 ntBASIC6.13□□□□□ -1.43
Trim11Q99PQ2 Gm19202-201ENSMUST00000198096 808 ntBASIC6.13□□□□□ -1.43
Trim11Q99PQ2 Mir219c-201ENSMUST00000199860 60 ntBASIC6.13□□□□□ -1.43
Trim11Q99PQ2 Gm43456-201ENSMUST00000202519 457 ntBASIC6.13□□□□□ -1.43
Trim11Q99PQ2 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC6.13□□□□□ -1.43
Trim11Q99PQ2 Gm45409-201ENSMUST00000211486 252 ntBASIC6.13□□□□□ -1.43
Trim11Q99PQ2 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC6.13□□□□□ -1.43
Trim11Q99PQ2 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC6.13□□□□□ -1.43
Trim11Q99PQ2 AC138290.2-201ENSMUST00000218822 369 ntBASIC6.13□□□□□ -1.43
Trim11Q99PQ2 AC160114.2-201ENSMUST00000223021 300 ntBASIC6.13□□□□□ -1.43
Trim11Q99PQ2 AC170086.1-201ENSMUST00000225190 497 ntBASIC6.13□□□□□ -1.43
Trim11Q99PQ2 AC139350.4-201ENSMUST00000228483 798 ntBASIC6.13□□□□□ -1.43
Trim11Q99PQ2 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim11Q99PQ2 Olfr1193-201ENSMUST00000081697 957 ntBASIC6.13□□□□□ -1.43
Trim11Q99PQ2 Gm23511-201ENSMUST00000083084 164 ntBASIC6.13□□□□□ -1.43
Trim11Q99PQ2 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim11Q99PQ2 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Trim11Q99PQ2 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim11Q99PQ2 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC6.13□□□□□ -1.43
Trim11Q99PQ2 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim11Q99PQ2 AC102369.2-201ENSMUST00000219725 1679 ntBASIC6.13□□□□□ -1.43
Trim11Q99PQ2 Gm42600-201ENSMUST00000202081 3588 ntBASIC6.13□□□□□ -1.43
Trim11Q99PQ2 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trim11Q99PQ2 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim11Q99PQ2 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trim11Q99PQ2 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim11Q99PQ2 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Gm23578-201ENSMUST00000103943 104 ntBASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Gm14050-201ENSMUST00000117052 346 ntBASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Gm12787-201ENSMUST00000119234 396 ntBASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Gm13356-201ENSMUST00000121678 335 ntBASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Gm23669-201ENSMUST00000157470 128 ntBASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Gm25982-201ENSMUST00000157920 101 ntBASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Gm17538-201ENSMUST00000168236 327 ntBASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Gm17907-201ENSMUST00000173150 710 ntBASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Mir7082-201ENSMUST00000183526 92 ntBASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Mir6244-201ENSMUST00000184156 117 ntBASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Gm21856-201ENSMUST00000187547 696 ntBASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Gm21735-201ENSMUST00000190360 696 ntBASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Gm28188-201ENSMUST00000190483 236 ntBASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Gm38015-201ENSMUST00000193048 188 ntBASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Gm37746-201ENSMUST00000193249 198 ntBASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Gm2053-201ENSMUST00000195671 631 ntBASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Gm42522-201ENSMUST00000196071 255 ntBASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Gm43083-201ENSMUST00000199594 476 ntBASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trim11Q99PQ2 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC6.12□□□□□ -1.43
Trim11Q99PQ2 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trim11Q99PQ2 AC134254.2-201ENSMUST00000221262 170 ntBASIC6.12□□□□□ -1.43
Trim11Q99PQ2 AL672194.1-201ENSMUST00000224841 603 ntBASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Olfr881-201ENSMUST00000074611 948 ntBASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trim11Q99PQ2 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Gm26225-201ENSMUST00000082508 135 ntBASIC6.12□□□□□ -1.43
Trim11Q99PQ2 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms