Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 n-R5s21-201ENSMUST00000122692 117 ntBASIC4.83□□□□□ -1.64
Clrn1Q8K445 n-R5s61-201ENSMUST00000122711 118 ntBASIC4.83□□□□□ -1.64
Clrn1Q8K445 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Clrn1Q8K445 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Clrn1Q8K445 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Clrn1Q8K445 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC4.83□□□□□ -1.64
Clrn1Q8K445 Gm22491-201ENSMUST00000157190 102 ntBASIC4.83□□□□□ -1.64
Clrn1Q8K445 Gm23993-201ENSMUST00000157478 144 ntBASIC4.83□□□□□ -1.64
Clrn1Q8K445 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Clrn1Q8K445 Gm17421-201ENSMUST00000167845 674 ntBASIC4.83□□□□□ -1.64
Clrn1Q8K445 Gm22307-201ENSMUST00000180019 107 ntBASIC4.83□□□□□ -1.64
Clrn1Q8K445 Gm26988-201ENSMUST00000183296 945 ntBASIC4.83□□□□□ -1.64
Clrn1Q8K445 Gm27332-201ENSMUST00000184893 112 ntBASIC4.83□□□□□ -1.64
Clrn1Q8K445 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Clrn1Q8K445 Gm28666-201ENSMUST00000186649 274 ntBASIC4.83□□□□□ -1.64
Clrn1Q8K445 Gm28700-201ENSMUST00000187614 579 ntBASIC4.83□□□□□ -1.64
Clrn1Q8K445 Gm43601-201ENSMUST00000196294 945 ntBASIC4.83□□□□□ -1.64
Clrn1Q8K445 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC4.83□□□□□ -1.64
Clrn1Q8K445 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Clrn1Q8K445 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Clrn1Q8K445 Gm45146-201ENSMUST00000207108 221 ntBASIC4.83□□□□□ -1.64
Clrn1Q8K445 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Clrn1Q8K445 Gm8423-201ENSMUST00000211387 607 ntBASIC4.83□□□□□ -1.64
Clrn1Q8K445 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Clrn1Q8K445 AC112956.1-201ENSMUST00000213563 492 ntBASIC4.83□□□□□ -1.64
Clrn1Q8K445 AC116460.1-201ENSMUST00000219040 313 ntBASIC4.83□□□□□ -1.64
Clrn1Q8K445 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC4.83□□□□□ -1.64
Clrn1Q8K445 AC154224.1-201ENSMUST00000224367 403 ntBASIC4.83□□□□□ -1.64
Clrn1Q8K445 AC154576.2-203ENSMUST00000224736 253 ntBASIC4.83□□□□□ -1.64
Clrn1Q8K445 AC163646.1-201ENSMUST00000227704 397 ntBASIC4.83□□□□□ -1.64
Clrn1Q8K445 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
Clrn1Q8K445 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Clrn1Q8K445 Gm23733-201ENSMUST00000083750 106 ntBASIC4.83□□□□□ -1.64
Clrn1Q8K445 Gm9386-201ENSMUST00000095195 381 ntBASIC4.83□□□□□ -1.64
Clrn1Q8K445 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Clrn1Q8K445 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC4.83□□□□□ -1.64
Clrn1Q8K445 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Clrn1Q8K445 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC4.83□□□□□ -1.64
Clrn1Q8K445 Gm44847-201ENSMUST00000207104 1991 ntBASIC4.83□□□□□ -1.64
Clrn1Q8K445 Gm6645-201ENSMUST00000118505 2726 ntBASIC4.83□□□□□ -1.64
Clrn1Q8K445 Gm43826-201ENSMUST00000199604 2612 ntBASIC4.83□□□□□ -1.64
Clrn1Q8K445 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
Clrn1Q8K445 Gm42704-201ENSMUST00000196875 1778 ntBASIC4.83□□□□□ -1.64
Clrn1Q8K445 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Clrn1Q8K445 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Clrn1Q8K445 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
Clrn1Q8K445 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Clrn1Q8K445 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Clrn1Q8K445 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Clrn1Q8K445 AC131586.2-202ENSMUST00000227016 2705 ntBASIC4.82□□□□□ -1.64
Clrn1Q8K445 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Clrn1Q8K445 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Clrn1Q8K445 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC4.82□□□□□ -1.64
Clrn1Q8K445 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Clrn1Q8K445 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
Clrn1Q8K445 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
Clrn1Q8K445 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
Clrn1Q8K445 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
Clrn1Q8K445 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Clrn1Q8K445 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Clrn1Q8K445 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Clrn1Q8K445 Gm14292-201ENSMUST00000118761 456 ntBASIC4.82□□□□□ -1.64
Clrn1Q8K445 Gm14655-201ENSMUST00000120124 578 ntBASIC4.82□□□□□ -1.64
Clrn1Q8K445 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC4.82□□□□□ -1.64
Clrn1Q8K445 Gm15177-201ENSMUST00000120491 577 ntBASIC4.82□□□□□ -1.64
Clrn1Q8K445 Gm12007-201ENSMUST00000120978 597 ntBASIC4.82□□□□□ -1.64
Clrn1Q8K445 Gm24836-201ENSMUST00000122609 108 ntBASIC4.82□□□□□ -1.64
Clrn1Q8K445 Gm23837-201ENSMUST00000122656 286 ntBASIC4.82□□□□□ -1.64
Clrn1Q8K445 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC4.82□□□□□ -1.64
Clrn1Q8K445 Gm15899-201ENSMUST00000128586 238 ntBASIC4.82□□□□□ -1.64
Clrn1Q8K445 Gm25970-201ENSMUST00000157165 86 ntBASIC4.82□□□□□ -1.64
Clrn1Q8K445 Gm25846-201ENSMUST00000158013 135 ntBASIC4.82□□□□□ -1.64
Clrn1Q8K445 Gm22434-201ENSMUST00000158549 122 ntBASIC4.82□□□□□ -1.64
Clrn1Q8K445 Gm23024-201ENSMUST00000158770 292 ntBASIC4.82□□□□□ -1.64
Clrn1Q8K445 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Clrn1Q8K445 Gm9071-201ENSMUST00000165915 474 ntBASIC4.82□□□□□ -1.64
Clrn1Q8K445 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC4.82□□□□□ -1.64
Clrn1Q8K445 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Clrn1Q8K445 Gm8221-201ENSMUST00000178052 564 ntBASIC4.82□□□□□ -1.64
Clrn1Q8K445 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Clrn1Q8K445 Gm26092-201ENSMUST00000179798 97 ntBASIC4.82□□□□□ -1.64
Clrn1Q8K445 Mir669a-1-201ENSMUST00000180238 97 ntBASIC4.82□□□□□ -1.64
Clrn1Q8K445 Gm28017-201ENSMUST00000183434 126 ntBASIC4.82□□□□□ -1.64
Clrn1Q8K445 Gm27688-201ENSMUST00000183634 91 ntBASIC4.82□□□□□ -1.64
Clrn1Q8K445 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC4.82□□□□□ -1.64
Clrn1Q8K445 Gm43541-201ENSMUST00000197208 581 ntBASIC4.82□□□□□ -1.64
Clrn1Q8K445 Gm42850-201ENSMUST00000202094 201 ntBASIC4.82□□□□□ -1.64
Clrn1Q8K445 Gm29848-201ENSMUST00000203107 295 ntBASIC4.82□□□□□ -1.64
Clrn1Q8K445 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Clrn1Q8K445 Gm45049-201ENSMUST00000207586 591 ntBASIC4.82□□□□□ -1.64
Clrn1Q8K445 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC4.82□□□□□ -1.64
Clrn1Q8K445 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC4.82□□□□□ -1.64
Clrn1Q8K445 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC4.82□□□□□ -1.64
Clrn1Q8K445 Gm6474-201ENSMUST00000223250 699 ntBASIC4.82□□□□□ -1.64
Clrn1Q8K445 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
Clrn1Q8K445 CT025602.1-201ENSMUST00000227281 382 ntBASIC4.82□□□□□ -1.64
Clrn1Q8K445 AC192088.3-201ENSMUST00000227858 831 ntBASIC4.82□□□□□ -1.64
Clrn1Q8K445 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Clrn1Q8K445 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC4.82□□□□□ -1.64
Clrn1Q8K445 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 97.8 ms