Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm27387-201ENSMUST00000184583 116 ntBASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Gm8403-201ENSMUST00000189712 1298 ntBASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Gm37601-201ENSMUST00000194922 394 ntBASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Gm18791-201ENSMUST00000204611 726 ntBASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC5.43□□□□□ -1.54
Brf1Q8CFK2 AC158525.1-201ENSMUST00000223806 576 ntBASIC5.43□□□□□ -1.54
Brf1Q8CFK2 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Brf1Q8CFK2 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Brf1Q8CFK2 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Gm43443-201ENSMUST00000202337 2393 ntBASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Brf1Q8CFK2 AC124746.1-201ENSMUST00000227535 1300 ntBASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Gm5117-201ENSMUST00000178878 2553 ntBASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Brf1Q8CFK2 Gm43605-201ENSMUST00000199663 3426 ntBASIC5.42□□□□□ -1.54
Brf1Q8CFK2 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Brf1Q8CFK2 Gm14878-201ENSMUST00000118167 293 ntBASIC5.42□□□□□ -1.54
Brf1Q8CFK2 Gm11781-201ENSMUST00000118328 472 ntBASIC5.42□□□□□ -1.54
Brf1Q8CFK2 Gm14899-201ENSMUST00000118673 548 ntBASIC5.42□□□□□ -1.54
Brf1Q8CFK2 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Brf1Q8CFK2 Gm23501-201ENSMUST00000157744 256 ntBASIC5.42□□□□□ -1.54
Brf1Q8CFK2 Gm24636-201ENSMUST00000158673 288 ntBASIC5.42□□□□□ -1.54
Brf1Q8CFK2 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC5.42□□□□□ -1.54
Brf1Q8CFK2 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Brf1Q8CFK2 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC5.42□□□□□ -1.54
Brf1Q8CFK2 Gm27428-201ENSMUST00000184289 110 ntBASIC5.42□□□□□ -1.54
Brf1Q8CFK2 Gm28967-201ENSMUST00000187351 281 ntBASIC5.42□□□□□ -1.54
Brf1Q8CFK2 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC5.42□□□□□ -1.54
Brf1Q8CFK2 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Brf1Q8CFK2 Gm37433-201ENSMUST00000192695 678 ntBASIC5.42□□□□□ -1.54
Brf1Q8CFK2 Gm38046-201ENSMUST00000192733 550 ntBASIC5.42□□□□□ -1.54
Brf1Q8CFK2 Gm37441-201ENSMUST00000194430 678 ntBASIC5.42□□□□□ -1.54
Brf1Q8CFK2 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC5.42□□□□□ -1.54
Brf1Q8CFK2 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
Brf1Q8CFK2 Gm18306-201ENSMUST00000207338 569 ntBASIC5.42□□□□□ -1.54
Brf1Q8CFK2 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC5.42□□□□□ -1.54
Brf1Q8CFK2 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC5.42□□□□□ -1.54
Brf1Q8CFK2 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC5.42□□□□□ -1.54
Brf1Q8CFK2 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC5.42□□□□□ -1.54
Brf1Q8CFK2 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC5.42□□□□□ -1.54
Brf1Q8CFK2 AC134468.2-201ENSMUST00000222549 672 ntBASIC5.42□□□□□ -1.54
Brf1Q8CFK2 AC139758.1-201ENSMUST00000226573 930 ntBASIC5.42□□□□□ -1.54
Brf1Q8CFK2 AC107369.1-201ENSMUST00000227373 860 ntBASIC5.42□□□□□ -1.54
Brf1Q8CFK2 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC5.42□□□□□ -1.54
Brf1Q8CFK2 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Brf1Q8CFK2 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC5.42□□□□□ -1.54
Brf1Q8CFK2 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Brf1Q8CFK2 Gm37930-201ENSMUST00000194308 1886 ntBASIC5.42□□□□□ -1.54
Brf1Q8CFK2 Gm42583-201ENSMUST00000202678 6700 ntBASIC5.42□□□□□ -1.54
Brf1Q8CFK2 Gm38259-201ENSMUST00000194602 3534 ntBASIC5.42□□□□□ -1.54
Brf1Q8CFK2 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Brf1Q8CFK2 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Brf1Q8CFK2 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Brf1Q8CFK2 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Gm43665-201ENSMUST00000198672 1659 ntBASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Gm42484-201ENSMUST00000196075 2104 ntBASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Gm12102-201ENSMUST00000118251 604 ntBASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Gm15923-201ENSMUST00000119300 1169 ntBASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Gm11943-201ENSMUST00000119473 327 ntBASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Gm13232-201ENSMUST00000121816 632 ntBASIC5.41□□□□□ -1.54
Brf1Q8CFK2 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Gm22390-201ENSMUST00000157588 325 ntBASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Gm16545-201ENSMUST00000161968 463 ntBASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Gm15796-201ENSMUST00000162135 204 ntBASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Gm23638-201ENSMUST00000175073 126 ntBASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Gm23158-201ENSMUST00000175076 126 ntBASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Gm22907-201ENSMUST00000175198 126 ntBASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Gm22625-201ENSMUST00000175382 126 ntBASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Gm22875-201ENSMUST00000175449 126 ntBASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Gm25197-201ENSMUST00000175516 126 ntBASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Gm27857-201ENSMUST00000176930 126 ntBASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Gm26268-201ENSMUST00000177685 126 ntBASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Gm23681-201ENSMUST00000178821 126 ntBASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Gm27568-201ENSMUST00000184220 99 ntBASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Gm27940-201ENSMUST00000184449 98 ntBASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Gm27457-201ENSMUST00000184771 156 ntBASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Gm29550-201ENSMUST00000185543 285 ntBASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Gm43556-201ENSMUST00000196186 681 ntBASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Gm33626-201ENSMUST00000206790 828 ntBASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Brf1Q8CFK2 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC5.41□□□□□ -1.54
Brf1Q8CFK2 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC5.41□□□□□ -1.54
Brf1Q8CFK2 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms