Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Atg4aQ8C9S8 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Atg4aQ8C9S8 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Atg4aQ8C9S8 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Atg4aQ8C9S8 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Atg4aQ8C9S8 Gm43313-201ENSMUST00000201398 2235 ntBASIC4.69□□□□□ -1.66
Atg4aQ8C9S8 AC101945.4-201ENSMUST00000228464 1976 ntBASIC4.69□□□□□ -1.66
Atg4aQ8C9S8 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Atg4aQ8C9S8 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Atg4aQ8C9S8 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Atg4aQ8C9S8 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Atg4aQ8C9S8 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Atg4aQ8C9S8 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 AC153948.1-201ENSMUST00000219080 3838 ntBASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Gm45263-201ENSMUST00000210377 1375 ntBASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Gm14913-201ENSMUST00000120011 1093 ntBASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Gm14725-201ENSMUST00000120324 828 ntBASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Gm13502-201ENSMUST00000121574 684 ntBASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Gm16327-201ENSMUST00000137146 228 ntBASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Gm25436-201ENSMUST00000158275 145 ntBASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Gm23387-201ENSMUST00000158586 107 ntBASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Gm20693-201ENSMUST00000177431 211 ntBASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Gm24417-201ENSMUST00000178123 79 ntBASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Gm24653-201ENSMUST00000178541 79 ntBASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Gm25934-201ENSMUST00000178642 79 ntBASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Mir713-201ENSMUST00000178651 108 ntBASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Gm25120-201ENSMUST00000180148 79 ntBASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Gm26556-201ENSMUST00000180645 320 ntBASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Gm27033-201ENSMUST00000183226 544 ntBASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Gm27155-201ENSMUST00000183716 898 ntBASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Mir6899-201ENSMUST00000184798 64 ntBASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Gm35570-201ENSMUST00000198730 681 ntBASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Gm44277-201ENSMUST00000205128 649 ntBASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Gm45551-201ENSMUST00000211459 928 ntBASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Gm8106-201ENSMUST00000213123 523 ntBASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Gm5649-201ENSMUST00000217918 951 ntBASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 AC147639.1-201ENSMUST00000224216 661 ntBASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 AC107663.3-201ENSMUST00000225873 601 ntBASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 AC121542.1-201ENSMUST00000227245 721 ntBASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Atg4aQ8C9S8 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Atg4aQ8C9S8 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Atg4aQ8C9S8 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Atg4aQ8C9S8 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Atg4aQ8C9S8 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Atg4aQ8C9S8 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.67□□□□□ -1.66
Atg4aQ8C9S8 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
Atg4aQ8C9S8 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
Atg4aQ8C9S8 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Atg4aQ8C9S8 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC4.67□□□□□ -1.66
Atg4aQ8C9S8 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC4.67□□□□□ -1.66
Atg4aQ8C9S8 Gm13865-201ENSMUST00000120957 865 ntBASIC4.67□□□□□ -1.66
Atg4aQ8C9S8 Gm8244-201ENSMUST00000121254 264 ntBASIC4.67□□□□□ -1.66
Atg4aQ8C9S8 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC4.67□□□□□ -1.66
Atg4aQ8C9S8 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC4.67□□□□□ -1.66
Atg4aQ8C9S8 Gm22817-201ENSMUST00000157448 356 ntBASIC4.67□□□□□ -1.66
Atg4aQ8C9S8 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Atg4aQ8C9S8 Gm2966-201ENSMUST00000166052 481 ntBASIC4.67□□□□□ -1.66
Atg4aQ8C9S8 Gm17204-201ENSMUST00000167936 478 ntBASIC4.67□□□□□ -1.66
Atg4aQ8C9S8 Samd15-201ENSMUST00000169669 1194 ntBASIC4.67□□□□□ -1.66
Atg4aQ8C9S8 Gm24754-201ENSMUST00000177997 107 ntBASIC4.67□□□□□ -1.66
Atg4aQ8C9S8 Gm28118-201ENSMUST00000185957 294 ntBASIC4.67□□□□□ -1.66
Atg4aQ8C9S8 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC4.67□□□□□ -1.66
Atg4aQ8C9S8 Gm37098-201ENSMUST00000192290 244 ntBASIC4.67□□□□□ -1.66
Atg4aQ8C9S8 Mir129b-201ENSMUST00000197461 65 ntBASIC4.67□□□□□ -1.66
Atg4aQ8C9S8 Gm44988-201ENSMUST00000203835 1161 ntBASIC4.67□□□□□ -1.66
Atg4aQ8C9S8 Gm18855-201ENSMUST00000206689 570 ntBASIC4.67□□□□□ -1.66
Atg4aQ8C9S8 Gm44919-201ENSMUST00000208587 1073 ntBASIC4.67□□□□□ -1.66
Atg4aQ8C9S8 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC4.67□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms