Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Trerf1Q8BXJ2 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Trerf1Q8BXJ2 Gm37099-201ENSMUST00000191902 3451 ntBASIC4.91□□□□□ -1.62
Trerf1Q8BXJ2 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Trerf1Q8BXJ2 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.62
Trerf1Q8BXJ2 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.9□□□□□ -1.62
Trerf1Q8BXJ2 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Trerf1Q8BXJ2 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Trerf1Q8BXJ2 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Trerf1Q8BXJ2 AC102431.1-201ENSMUST00000223773 1449 ntBASIC4.9□□□□□ -1.62
Trerf1Q8BXJ2 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Trerf1Q8BXJ2 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
Trerf1Q8BXJ2 Gm5347-201ENSMUST00000210542 2327 ntBASIC4.9□□□□□ -1.62
Trerf1Q8BXJ2 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Trerf1Q8BXJ2 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Trerf1Q8BXJ2 AC154677.1-201ENSMUST00000227636 2805 ntBASIC4.9□□□□□ -1.62
Trerf1Q8BXJ2 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC4.9□□□□□ -1.62
Trerf1Q8BXJ2 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 Gm15030-201ENSMUST00000119804 484 ntBASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 Gm15926-201ENSMUST00000120492 550 ntBASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 Gm3362-201ENSMUST00000148102 466 ntBASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 Gm22084-201ENSMUST00000157585 105 ntBASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 Gm6395-201ENSMUST00000167639 691 ntBASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 S100a11-ps-201ENSMUST00000181735 306 ntBASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 Gm18117-201ENSMUST00000187720 742 ntBASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 Gm29332-201ENSMUST00000190829 227 ntBASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 Gm28724-202ENSMUST00000194218 295 ntBASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 Trbv11-201ENSMUST00000194354 260 ntBASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 Gm42958-201ENSMUST00000197595 318 ntBASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 Gm43708-201ENSMUST00000198857 961 ntBASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 Gm43005-201ENSMUST00000199015 648 ntBASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 Gm45658-201ENSMUST00000209197 580 ntBASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 Gm8681-201ENSMUST00000219115 618 ntBASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 Gm8158-201ENSMUST00000219220 465 ntBASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 Gm8112-201ENSMUST00000219637 465 ntBASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 AC116465.1-201ENSMUST00000220324 235 ntBASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 AC131085.1-201ENSMUST00000224746 656 ntBASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 AC114916.1-201ENSMUST00000228465 494 ntBASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 Gm10115-201ENSMUST00000076071 1228 ntBASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 n-R5s3-201ENSMUST00000083879 112 ntBASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 AC164102.1-201ENSMUST00000220524 1553 ntBASIC4.9□□□□□ -1.63
Trerf1Q8BXJ2 Gm42842-201ENSMUST00000197736 3004 ntBASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 Gm22899-201ENSMUST00000104540 131 ntBASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 Gm15560-201ENSMUST00000117107 643 ntBASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 Gm12387-201ENSMUST00000118573 955 ntBASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 Gm12820-201ENSMUST00000119233 342 ntBASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 Mup-ps18-201ENSMUST00000120145 531 ntBASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 Gm14848-201ENSMUST00000121850 467 ntBASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 Gm25966-201ENSMUST00000157169 117 ntBASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 Gm6155-201ENSMUST00000173735 341 ntBASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 Gm21991-201ENSMUST00000180006 508 ntBASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 Mir6344-201ENSMUST00000183462 104 ntBASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 Gm29184-201ENSMUST00000190038 334 ntBASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 Gm43810-201ENSMUST00000201018 232 ntBASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 Gm44050-201ENSMUST00000204263 527 ntBASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 Gm44212-201ENSMUST00000205016 897 ntBASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 Gm19237-201ENSMUST00000205036 1132 ntBASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 AC160134.1-201ENSMUST00000213450 551 ntBASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 AC167192.1-201ENSMUST00000225908 139 ntBASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Trerf1Q8BXJ2 Mir338-201ENSMUST00000083666 98 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms