Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Nup54Q8BTS4 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Nup54Q8BTS4 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Nup54Q8BTS4 Gm15933-201ENSMUST00000117215 616 ntBASIC4.09□□□□□ -1.75
Nup54Q8BTS4 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.09□□□□□ -1.75
Nup54Q8BTS4 Gm13459-201ENSMUST00000121558 646 ntBASIC4.09□□□□□ -1.75
Nup54Q8BTS4 Gm11645-201ENSMUST00000121589 649 ntBASIC4.09□□□□□ -1.75
Nup54Q8BTS4 Gm16373-201ENSMUST00000129517 303 ntBASIC4.09□□□□□ -1.75
Nup54Q8BTS4 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
Nup54Q8BTS4 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC4.09□□□□□ -1.75
Nup54Q8BTS4 Gm25150-201ENSMUST00000157121 60 ntBASIC4.09□□□□□ -1.75
Nup54Q8BTS4 Gm24898-201ENSMUST00000158133 106 ntBASIC4.09□□□□□ -1.75
Nup54Q8BTS4 Gm16026-202ENSMUST00000159695 772 ntBASIC4.09□□□□□ -1.75
Nup54Q8BTS4 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Nup54Q8BTS4 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.09□□□□□ -1.75
Nup54Q8BTS4 Gm8498-201ENSMUST00000188227 974 ntBASIC4.09□□□□□ -1.75
Nup54Q8BTS4 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC4.09□□□□□ -1.75
Nup54Q8BTS4 Gm22897-201ENSMUST00000197860 128 ntBASIC4.09□□□□□ -1.75
Nup54Q8BTS4 Gm44371-201ENSMUST00000204148 467 ntBASIC4.09□□□□□ -1.75
Nup54Q8BTS4 Gm45189-201ENSMUST00000208567 363 ntBASIC4.09□□□□□ -1.75
Nup54Q8BTS4 Gm6303-201ENSMUST00000210123 471 ntBASIC4.09□□□□□ -1.75
Nup54Q8BTS4 Gm5655-201ENSMUST00000221078 901 ntBASIC4.09□□□□□ -1.75
Nup54Q8BTS4 AC135377.1-201ENSMUST00000223692 463 ntBASIC4.09□□□□□ -1.75
Nup54Q8BTS4 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Nup54Q8BTS4 Gm23677-201ENSMUST00000083156 104 ntBASIC4.09□□□□□ -1.75
Nup54Q8BTS4 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Nup54Q8BTS4 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.09□□□□□ -1.75
Nup54Q8BTS4 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Nup54Q8BTS4 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Nup54Q8BTS4 Gm38212-201ENSMUST00000194081 2756 ntBASIC4.09□□□□□ -1.75
Nup54Q8BTS4 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Nup54Q8BTS4 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
Nup54Q8BTS4 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Nup54Q8BTS4 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Nup54Q8BTS4 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
Nup54Q8BTS4 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Nup54Q8BTS4 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.09□□□□□ -1.76
Nup54Q8BTS4 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
Nup54Q8BTS4 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Nup54Q8BTS4 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.76
Nup54Q8BTS4 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Nup54Q8BTS4 Gm38065-201ENSMUST00000193147 3492 ntBASIC4.08□□□□□ -1.76
Nup54Q8BTS4 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Gm23322-201ENSMUST00000104464 167 ntBASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Gm15001-201ENSMUST00000117657 795 ntBASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Gm7363-201ENSMUST00000119883 399 ntBASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Gm11718-201ENSMUST00000119942 537 ntBASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Gm13677-201ENSMUST00000120739 595 ntBASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Gm6565-201ENSMUST00000121217 438 ntBASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Gm22986-201ENSMUST00000122753 130 ntBASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Gm5924-201ENSMUST00000132554 871 ntBASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Gm26187-201ENSMUST00000157693 101 ntBASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Gm24773-201ENSMUST00000158513 99 ntBASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Gm23198-201ENSMUST00000158811 91 ntBASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Gm2389-201ENSMUST00000160487 189 ntBASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Gm22111-201ENSMUST00000178010 79 ntBASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Gm23687-201ENSMUST00000178664 79 ntBASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Gm24566-201ENSMUST00000179286 79 ntBASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Gm23305-201ENSMUST00000179342 79 ntBASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Gm26389-201ENSMUST00000179819 79 ntBASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Gm22130-201ENSMUST00000179979 79 ntBASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Gm22393-201ENSMUST00000180153 79 ntBASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Gm25085-201ENSMUST00000180298 79 ntBASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Gm38104-201ENSMUST00000195121 1895 ntBASIC4.08□□□□□ -1.76
Nup54Q8BTS4 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Nup54Q8BTS4 n-TSaga9-201ENSMUST00000197675 107 ntBASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC4.08□□□□□ -1.76
Nup54Q8BTS4 AL772397.1-201ENSMUST00000216707 606 ntBASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Gm4263-202ENSMUST00000221392 667 ntBASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Gm5155-201ENSMUST00000072381 2841 ntBASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Gm10042-201ENSMUST00000079884 78 ntBASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Snord14e-201ENSMUST00000082857 90 ntBASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Gm25200-201ENSMUST00000083094 130 ntBASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Gm25481-201ENSMUST00000083221 158 ntBASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Gm6361-201ENSMUST00000091031 435 ntBASIC4.08□□□□□ -1.76
Nup54Q8BTS4 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
Nup54Q8BTS4 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Nup54Q8BTS4 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.08□□□□□ -1.76
Nup54Q8BTS4 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Nup54Q8BTS4 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC4.07□□□□□ -1.76
Nup54Q8BTS4 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Nup54Q8BTS4 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms