Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm24788-201ENSMUST00000104283 156 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Gm13064-201ENSMUST00000119125 557 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Gm12852-201ENSMUST00000119478 719 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Gm12103-201ENSMUST00000121892 362 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Defa-ps12-201ENSMUST00000122353 193 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Gm25278-201ENSMUST00000157267 120 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Gm25665-201ENSMUST00000157695 110 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Gm24002-201ENSMUST00000158456 104 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Mir3090-201ENSMUST00000175597 87 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Gm14527-201ENSMUST00000179300 639 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Gm28385-201ENSMUST00000185671 292 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Gm28574-201ENSMUST00000185757 699 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Gm28781-201ENSMUST00000185760 696 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Gm28339-201ENSMUST00000185845 696 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Gm29062-201ENSMUST00000186032 694 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Gm29574-201ENSMUST00000186226 696 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Gm28828-201ENSMUST00000186601 696 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Gm28057-201ENSMUST00000186603 615 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Gm28255-201ENSMUST00000187101 694 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Gm29307-201ENSMUST00000187367 696 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Gm28397-201ENSMUST00000187970 699 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Gm28896-201ENSMUST00000188609 696 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Gm29545-201ENSMUST00000188878 694 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Gm29196-201ENSMUST00000189239 618 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Gm29339-201ENSMUST00000189613 696 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Gm28159-201ENSMUST00000190296 696 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Gm29366-201ENSMUST00000190481 699 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Gm29407-201ENSMUST00000191468 696 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Gm37433-201ENSMUST00000192695 678 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Gm37441-201ENSMUST00000194430 678 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Gm38107-201ENSMUST00000194873 696 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Gm43424-201ENSMUST00000200484 253 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Gm9375-201ENSMUST00000208899 903 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 CR974429.1-201ENSMUST00000220877 827 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 AC090496.1-201ENSMUST00000226020 260 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 AC140393.2-201ENSMUST00000226894 943 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Gm23464-201ENSMUST00000083145 147 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Gm36969-201ENSMUST00000194551 2809 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Gm37879-201ENSMUST00000193112 1995 ntBASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ccdc40Q8BI79 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Gm24544-201ENSMUST00000103862 110 ntBASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Gm15560-201ENSMUST00000117107 643 ntBASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Gm11432-201ENSMUST00000117334 231 ntBASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Gm13478-201ENSMUST00000118312 413 ntBASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Gm13359-201ENSMUST00000119000 695 ntBASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Gm5392-201ENSMUST00000122189 789 ntBASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Gm23792-201ENSMUST00000122557 93 ntBASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Gm26045-201ENSMUST00000157862 97 ntBASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Adgrg4-206ENSMUST00000168724 531 ntBASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Gm7497-201ENSMUST00000183064 1003 ntBASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Gm6802-202ENSMUST00000186566 126 ntBASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Gm5731-201ENSMUST00000190969 481 ntBASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Gm37300-201ENSMUST00000193327 280 ntBASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Gm38098-201ENSMUST00000194115 241 ntBASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Gm36259-201ENSMUST00000197340 392 ntBASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Gm44259-201ENSMUST00000204996 298 ntBASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 AC159380.1-201ENSMUST00000218096 121 ntBASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 CT030194.1-201ENSMUST00000225507 532 ntBASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 AC174459.2-201ENSMUST00000226036 160 ntBASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 AC121542.1-201ENSMUST00000227245 721 ntBASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Gm22829-201ENSMUST00000083771 106 ntBASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Ccdc40Q8BI79 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms