Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm25052-201ENSMUST00000122661 158 ntBASIC4.62□□□□□ -1.67
Ubfd1Q78JW9 Gm24751-201ENSMUST00000157844 102 ntBASIC4.62□□□□□ -1.67
Ubfd1Q78JW9 Mir1947-201ENSMUST00000158235 85 ntBASIC4.62□□□□□ -1.67
Ubfd1Q78JW9 Gm26991-201ENSMUST00000180950 620 ntBASIC4.62□□□□□ -1.67
Ubfd1Q78JW9 Gm27538-201ENSMUST00000185065 294 ntBASIC4.62□□□□□ -1.67
Ubfd1Q78JW9 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Ubfd1Q78JW9 Gm29641-201ENSMUST00000188955 259 ntBASIC4.62□□□□□ -1.67
Ubfd1Q78JW9 Gm31230-201ENSMUST00000199725 785 ntBASIC4.62□□□□□ -1.67
Ubfd1Q78JW9 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC4.62□□□□□ -1.67
Ubfd1Q78JW9 Gm46146-201ENSMUST00000217483 346 ntBASIC4.62□□□□□ -1.67
Ubfd1Q78JW9 Gm29884-201ENSMUST00000218403 453 ntBASIC4.62□□□□□ -1.67
Ubfd1Q78JW9 AC154626.1-201ENSMUST00000226070 311 ntBASIC4.62□□□□□ -1.67
Ubfd1Q78JW9 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Ubfd1Q78JW9 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Ubfd1Q78JW9 Gm24150-201ENSMUST00000082759 104 ntBASIC4.62□□□□□ -1.67
Ubfd1Q78JW9 Gm25140-201ENSMUST00000083254 140 ntBASIC4.62□□□□□ -1.67
Ubfd1Q78JW9 Gm23460-201ENSMUST00000083258 109 ntBASIC4.62□□□□□ -1.67
Ubfd1Q78JW9 Gm42537-201ENSMUST00000198260 2574 ntBASIC4.62□□□□□ -1.67
Ubfd1Q78JW9 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
Ubfd1Q78JW9 AC108802.1-201ENSMUST00000219501 3142 ntBASIC4.62□□□□□ -1.67
Ubfd1Q78JW9 Gm44321-201ENSMUST00000204262 2855 ntBASIC4.62□□□□□ -1.67
Ubfd1Q78JW9 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC4.62□□□□□ -1.67
Ubfd1Q78JW9 Gm42548-201ENSMUST00000202669 3933 ntBASIC4.62□□□□□ -1.67
Ubfd1Q78JW9 AC122357.1-201ENSMUST00000221652 1515 ntBASIC4.62□□□□□ -1.67
Ubfd1Q78JW9 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Gm45872-201ENSMUST00000209804 1584 ntBASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 AC115970.1-201ENSMUST00000218910 1758 ntBASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Gm12598-201ENSMUST00000117333 830 ntBASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Defa-ps15-201ENSMUST00000118178 477 ntBASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Gm15312-201ENSMUST00000118827 271 ntBASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Gm11913-201ENSMUST00000119094 336 ntBASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Gm11742-201ENSMUST00000119903 233 ntBASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Gm12332-201ENSMUST00000121397 922 ntBASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Gm16458-201ENSMUST00000121428 502 ntBASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Gm15309-201ENSMUST00000121644 240 ntBASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Gm23465-201ENSMUST00000157134 262 ntBASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Gm24507-201ENSMUST00000157683 134 ntBASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Gm24393-201ENSMUST00000158135 97 ntBASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Gm27861-201ENSMUST00000183920 214 ntBASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Gm28116-201ENSMUST00000189064 387 ntBASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Gm19066-201ENSMUST00000193232 1078 ntBASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Gm37272-201ENSMUST00000193401 488 ntBASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Gm9238-201ENSMUST00000196181 329 ntBASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Gm43489-201ENSMUST00000196810 993 ntBASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Gm43214-201ENSMUST00000199242 352 ntBASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Gm46436-201ENSMUST00000221851 1294 ntBASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 CT025689.2-201ENSMUST00000224979 429 ntBASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 AC154594.1-201ENSMUST00000225171 1273 ntBASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 AC164116.1-201ENSMUST00000225810 622 ntBASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 AC154335.2-201ENSMUST00000225916 638 ntBASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Gm25147-201ENSMUST00000083030 105 ntBASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 n-R5s79-201ENSMUST00000083071 120 ntBASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Gm25818-201ENSMUST00000083282 164 ntBASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Ubfd1Q78JW9 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Ubfd1Q78JW9 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Ubfd1Q78JW9 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Ubfd1Q78JW9 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Ubfd1Q78JW9 AC101945.4-201ENSMUST00000228464 1976 ntBASIC4.6□□□□□ -1.67
Ubfd1Q78JW9 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Ubfd1Q78JW9 Gm23948-201ENSMUST00000104030 132 ntBASIC4.6□□□□□ -1.67
Ubfd1Q78JW9 Gm24855-201ENSMUST00000104848 97 ntBASIC4.6□□□□□ -1.67
Ubfd1Q78JW9 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Ubfd1Q78JW9 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC4.6□□□□□ -1.67
Ubfd1Q78JW9 Gm13491-201ENSMUST00000118267 235 ntBASIC4.6□□□□□ -1.67
Ubfd1Q78JW9 Gm15333-201ENSMUST00000118825 364 ntBASIC4.6□□□□□ -1.67
Ubfd1Q78JW9 Gm14517-201ENSMUST00000119040 337 ntBASIC4.6□□□□□ -1.67
Ubfd1Q78JW9 Gm14607-201ENSMUST00000119119 491 ntBASIC4.6□□□□□ -1.67
Ubfd1Q78JW9 Gm11623-201ENSMUST00000120176 1225 ntBASIC4.6□□□□□ -1.67
Ubfd1Q78JW9 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC4.6□□□□□ -1.67
Ubfd1Q78JW9 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Ubfd1Q78JW9 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC4.6□□□□□ -1.67
Ubfd1Q78JW9 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC4.6□□□□□ -1.67
Ubfd1Q78JW9 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Ubfd1Q78JW9 Gm19203-201ENSMUST00000174049 939 ntBASIC4.6□□□□□ -1.67
Ubfd1Q78JW9 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC4.6□□□□□ -1.67
Ubfd1Q78JW9 Gm4842-201ENSMUST00000183237 835 ntBASIC4.6□□□□□ -1.67
Ubfd1Q78JW9 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Ubfd1Q78JW9 Gm28660-201ENSMUST00000186496 253 ntBASIC4.6□□□□□ -1.67
Ubfd1Q78JW9 Gm20203-201ENSMUST00000192352 332 ntBASIC4.6□□□□□ -1.67
Ubfd1Q78JW9 Gm20162-201ENSMUST00000193629 871 ntBASIC4.6□□□□□ -1.67
Ubfd1Q78JW9 Gm37167-201ENSMUST00000194946 396 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 104.7 ms