Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm26991-201ENSMUST00000180950 620 ntBASIC4.91□□□□□ -1.62
Ift88Q61371 Gm29138-201ENSMUST00000191444 348 ntBASIC4.91□□□□□ -1.62
Ift88Q61371 Gm37418-201ENSMUST00000195031 274 ntBASIC4.91□□□□□ -1.62
Ift88Q61371 Gm43489-201ENSMUST00000196810 993 ntBASIC4.91□□□□□ -1.62
Ift88Q61371 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC4.91□□□□□ -1.62
Ift88Q61371 Gm43018-201ENSMUST00000198075 1275 ntBASIC4.91□□□□□ -1.62
Ift88Q61371 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Ift88Q61371 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC4.91□□□□□ -1.62
Ift88Q61371 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC4.91□□□□□ -1.62
Ift88Q61371 AC125543.1-201ENSMUST00000222778 101 ntBASIC4.91□□□□□ -1.62
Ift88Q61371 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Ift88Q61371 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC4.91□□□□□ -1.62
Ift88Q61371 Gm23510-201ENSMUST00000083083 163 ntBASIC4.91□□□□□ -1.62
Ift88Q61371 Gm43498-201ENSMUST00000202002 1486 ntBASIC4.91□□□□□ -1.62
Ift88Q61371 AC112142.1-203ENSMUST00000228670 2472 ntBASIC4.91□□□□□ -1.62
Ift88Q61371 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Ift88Q61371 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Ift88Q61371 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
Ift88Q61371 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
Ift88Q61371 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Ift88Q61371 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.91□□□□□ -1.62
Ift88Q61371 Gm43886-201ENSMUST00000205039 2386 ntBASIC4.91□□□□□ -1.62
Ift88Q61371 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Ift88Q61371 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Ift88Q61371 Gm36931-201ENSMUST00000192997 4801 ntBASIC4.9□□□□□ -1.62
Ift88Q61371 Gm43882-201ENSMUST00000204871 2264 ntBASIC4.9□□□□□ -1.62
Ift88Q61371 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC4.9□□□□□ -1.62
Ift88Q61371 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Ift88Q61371 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC4.9□□□□□ -1.62
Ift88Q61371 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Ift88Q61371 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC4.9□□□□□ -1.62
Ift88Q61371 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Ift88Q61371 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.9□□□□□ -1.62
Ift88Q61371 Gm42483-201ENSMUST00000197556 1742 ntBASIC4.9□□□□□ -1.62
Ift88Q61371 AC129085.3-201ENSMUST00000225686 1705 ntBASIC4.9□□□□□ -1.62
Ift88Q61371 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Ift88Q61371 Gm10552-201ENSMUST00000113396 372 ntBASIC4.9□□□□□ -1.63
Ift88Q61371 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC4.9□□□□□ -1.63
Ift88Q61371 Gm12697-201ENSMUST00000118008 667 ntBASIC4.9□□□□□ -1.63
Ift88Q61371 Gm13379-201ENSMUST00000118053 621 ntBASIC4.9□□□□□ -1.63
Ift88Q61371 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC4.9□□□□□ -1.63
Ift88Q61371 Gm15785-201ENSMUST00000119145 694 ntBASIC4.9□□□□□ -1.63
Ift88Q61371 Gm15387-201ENSMUST00000120421 648 ntBASIC4.9□□□□□ -1.63
Ift88Q61371 Gm6062-201ENSMUST00000120462 631 ntBASIC4.9□□□□□ -1.63
Ift88Q61371 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Ift88Q61371 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC4.9□□□□□ -1.63
Ift88Q61371 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
Ift88Q61371 Gm24393-201ENSMUST00000158135 97 ntBASIC4.9□□□□□ -1.63
Ift88Q61371 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC4.9□□□□□ -1.63
Ift88Q61371 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC4.9□□□□□ -1.63
Ift88Q61371 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC4.9□□□□□ -1.63
Ift88Q61371 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC4.9□□□□□ -1.63
Ift88Q61371 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Ift88Q61371 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Ift88Q61371 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC4.9□□□□□ -1.63
Ift88Q61371 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC4.9□□□□□ -1.63
Ift88Q61371 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
Ift88Q61371 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC4.9□□□□□ -1.63
Ift88Q61371 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC4.9□□□□□ -1.63
Ift88Q61371 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC4.9□□□□□ -1.63
Ift88Q61371 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC4.9□□□□□ -1.63
Ift88Q61371 Gm25412-201ENSMUST00000180258 107 ntBASIC4.9□□□□□ -1.63
Ift88Q61371 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC4.9□□□□□ -1.63
Ift88Q61371 Mir3473g-201ENSMUST00000183494 136 ntBASIC4.9□□□□□ -1.63
Ift88Q61371 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Ift88Q61371 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Ift88Q61371 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Ift88Q61371 Gm18181-201ENSMUST00000190670 736 ntBASIC4.9□□□□□ -1.63
Ift88Q61371 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Ift88Q61371 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.9□□□□□ -1.63
Ift88Q61371 Gm37164-201ENSMUST00000192809 637 ntBASIC4.9□□□□□ -1.63
Ift88Q61371 Gm37641-201ENSMUST00000193837 239 ntBASIC4.9□□□□□ -1.63
Ift88Q61371 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC4.9□□□□□ -1.63
Ift88Q61371 Gm43142-201ENSMUST00000198670 361 ntBASIC4.9□□□□□ -1.63
Ift88Q61371 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Ift88Q61371 AC153541.1-201ENSMUST00000213786 294 ntBASIC4.9□□□□□ -1.63
Ift88Q61371 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.9□□□□□ -1.63
Ift88Q61371 Gm18891-201ENSMUST00000216734 1087 ntBASIC4.9□□□□□ -1.63
Ift88Q61371 Gm3565-201ENSMUST00000222670 609 ntBASIC4.9□□□□□ -1.63
Ift88Q61371 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Ift88Q61371 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Ift88Q61371 Gm5518-201ENSMUST00000084171 648 ntBASIC4.9□□□□□ -1.63
Ift88Q61371 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Ift88Q61371 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC4.9□□□□□ -1.63
Ift88Q61371 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Ift88Q61371 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Ift88Q61371 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.9□□□□□ -1.63
Ift88Q61371 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Ift88Q61371 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Ift88Q61371 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Ift88Q61371 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Ift88Q61371 Gm37345-201ENSMUST00000193062 3138 ntBASIC4.9□□□□□ -1.63
Ift88Q61371 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Ift88Q61371 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Ift88Q61371 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Ift88Q61371 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Ift88Q61371 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
Ift88Q61371 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Ift88Q61371 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Ift88Q61371 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 134.6 ms