Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.76□□□□□ -1.65
CtcfQ61164 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC4.76□□□□□ -1.65
CtcfQ61164 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC4.76□□□□□ -1.65
CtcfQ61164 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CtcfQ61164 AC109180.1-201ENSMUST00000218676 398 ntBASIC4.76□□□□□ -1.65
CtcfQ61164 Gm46190-201ENSMUST00000219650 427 ntBASIC4.76□□□□□ -1.65
CtcfQ61164 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC4.76□□□□□ -1.65
CtcfQ61164 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CtcfQ61164 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CtcfQ61164 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CtcfQ61164 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.76□□□□□ -1.65
CtcfQ61164 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CtcfQ61164 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CtcfQ61164 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CtcfQ61164 Gm5925-201ENSMUST00000105016 1497 ntBASIC4.75□□□□□ -1.65
CtcfQ61164 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CtcfQ61164 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
CtcfQ61164 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.75□□□□□ -1.65
CtcfQ61164 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CtcfQ61164 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.75□□□□□ -1.65
CtcfQ61164 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CtcfQ61164 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CtcfQ61164 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
CtcfQ61164 Gm24160-201ENSMUST00000104594 126 ntBASIC4.75□□□□□ -1.65
CtcfQ61164 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC4.75□□□□□ -1.65
CtcfQ61164 Gm15159-201ENSMUST00000117062 764 ntBASIC4.75□□□□□ -1.65
CtcfQ61164 Gm15382-201ENSMUST00000118011 537 ntBASIC4.75□□□□□ -1.65
CtcfQ61164 Gm13785-201ENSMUST00000119099 690 ntBASIC4.75□□□□□ -1.65
CtcfQ61164 Gm14989-201ENSMUST00000120497 207 ntBASIC4.75□□□□□ -1.65
CtcfQ61164 Gm9001-201ENSMUST00000121642 399 ntBASIC4.75□□□□□ -1.65
CtcfQ61164 Gm7855-201ENSMUST00000137737 687 ntBASIC4.75□□□□□ -1.65
CtcfQ61164 Zakit-201ENSMUST00000157677 308 ntBASIC4.75□□□□□ -1.65
CtcfQ61164 Gm25655-201ENSMUST00000158465 290 ntBASIC4.75□□□□□ -1.65
CtcfQ61164 Gm24768-201ENSMUST00000158512 94 ntBASIC4.75□□□□□ -1.65
CtcfQ61164 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CtcfQ61164 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.75□□□□□ -1.65
CtcfQ61164 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC4.75□□□□□ -1.65
CtcfQ61164 Gm21850-201ENSMUST00000179792 359 ntBASIC4.75□□□□□ -1.65
CtcfQ61164 Gm29105-201ENSMUST00000187256 450 ntBASIC4.75□□□□□ -1.65
CtcfQ61164 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CtcfQ61164 Gm37578-201ENSMUST00000192256 1177 ntBASIC4.75□□□□□ -1.65
CtcfQ61164 Gm43582-201ENSMUST00000196149 343 ntBASIC4.75□□□□□ -1.65
CtcfQ61164 Gm42539-201ENSMUST00000197009 308 ntBASIC4.75□□□□□ -1.65
CtcfQ61164 Gm43476-201ENSMUST00000197873 405 ntBASIC4.75□□□□□ -1.65
CtcfQ61164 Gm43368-201ENSMUST00000200638 409 ntBASIC4.75□□□□□ -1.65
CtcfQ61164 Gm43004-201ENSMUST00000201872 703 ntBASIC4.75□□□□□ -1.65
CtcfQ61164 Gm45367-201ENSMUST00000210171 347 ntBASIC4.75□□□□□ -1.65
CtcfQ61164 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC4.75□□□□□ -1.65
CtcfQ61164 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CtcfQ61164 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC4.75□□□□□ -1.65
CtcfQ61164 Gm8264-201ENSMUST00000217801 465 ntBASIC4.75□□□□□ -1.65
CtcfQ61164 Gm8942-201ENSMUST00000217892 400 ntBASIC4.75□□□□□ -1.65
CtcfQ61164 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC4.75□□□□□ -1.65
CtcfQ61164 AC154552.5-201ENSMUST00000222352 207 ntBASIC4.75□□□□□ -1.65
CtcfQ61164 AC157654.1-201ENSMUST00000224130 820 ntBASIC4.75□□□□□ -1.65
CtcfQ61164 AC116395.1-201ENSMUST00000225480 1143 ntBASIC4.75□□□□□ -1.65
CtcfQ61164 AC167192.1-201ENSMUST00000225908 139 ntBASIC4.75□□□□□ -1.65
CtcfQ61164 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CtcfQ61164 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CtcfQ61164 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC4.75□□□□□ -1.65
CtcfQ61164 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CtcfQ61164 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CtcfQ61164 Gm13340-201ENSMUST00000117219 1545 ntBASIC4.75□□□□□ -1.65
CtcfQ61164 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CtcfQ61164 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.75□□□□□ -1.65
CtcfQ61164 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.75□□□□□ -1.65
CtcfQ61164 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
CtcfQ61164 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CtcfQ61164 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CtcfQ61164 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CtcfQ61164 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CtcfQ61164 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CtcfQ61164 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CtcfQ61164 Gm7646-201ENSMUST00000198590 1346 ntBASIC4.74□□□□□ -1.65
CtcfQ61164 Gm42551-201ENSMUST00000197701 1573 ntBASIC4.74□□□□□ -1.65
CtcfQ61164 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.74□□□□□ -1.65
CtcfQ61164 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CtcfQ61164 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CtcfQ61164 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CtcfQ61164 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.74□□□□□ -1.65
CtcfQ61164 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.74□□□□□ -1.65
CtcfQ61164 Gm24578-201ENSMUST00000103970 129 ntBASIC4.74□□□□□ -1.65
CtcfQ61164 Gm22473-201ENSMUST00000104114 132 ntBASIC4.74□□□□□ -1.65
CtcfQ61164 Gm12520-201ENSMUST00000117493 316 ntBASIC4.74□□□□□ -1.65
CtcfQ61164 Gm15785-201ENSMUST00000119145 694 ntBASIC4.74□□□□□ -1.65
CtcfQ61164 Gm15923-201ENSMUST00000119300 1169 ntBASIC4.74□□□□□ -1.65
CtcfQ61164 Defa-ps12-201ENSMUST00000122353 193 ntBASIC4.74□□□□□ -1.65
CtcfQ61164 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CtcfQ61164 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC4.74□□□□□ -1.65
CtcfQ61164 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC4.74□□□□□ -1.65
CtcfQ61164 Gm22378-201ENSMUST00000157481 111 ntBASIC4.74□□□□□ -1.65
CtcfQ61164 Gm23513-201ENSMUST00000158181 133 ntBASIC4.74□□□□□ -1.65
CtcfQ61164 Gm24675-201ENSMUST00000158757 259 ntBASIC4.74□□□□□ -1.65
CtcfQ61164 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CtcfQ61164 Gm8807-201ENSMUST00000179328 492 ntBASIC4.74□□□□□ -1.65
CtcfQ61164 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC4.74□□□□□ -1.65
CtcfQ61164 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CtcfQ61164 Gm27254-201ENSMUST00000183926 517 ntBASIC4.74□□□□□ -1.65
CtcfQ61164 Gm31123-201ENSMUST00000192094 666 ntBASIC4.74□□□□□ -1.65
CtcfQ61164 Gm7299-201ENSMUST00000194441 581 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms