Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
Ccdc88aQ5SNZ0 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ccdc88aQ5SNZ0 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ccdc88aQ5SNZ0 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm14825-201ENSMUST00000113538 701 ntBASIC4.25□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ccdc88aQ5SNZ0 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC4.25□□□□□ -1.73
Ccdc88aQ5SNZ0 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC4.25□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm14975-201ENSMUST00000118741 664 ntBASIC4.25□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm13170-201ENSMUST00000119716 643 ntBASIC4.25□□□□□ -1.73
Ccdc88aQ5SNZ0 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC4.25□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm42990-201ENSMUST00000199231 312 ntBASIC4.25□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm44084-201ENSMUST00000203947 409 ntBASIC4.25□□□□□ -1.73
Ccdc88aQ5SNZ0 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC4.25□□□□□ -1.73
Ccdc88aQ5SNZ0 AC118006.2-201ENSMUST00000224167 962 ntBASIC4.25□□□□□ -1.73
Ccdc88aQ5SNZ0 AF357428-201ENSMUST00000083815 69 ntBASIC4.25□□□□□ -1.73
Ccdc88aQ5SNZ0 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm44800-201ENSMUST00000207510 1855 ntBASIC4.25□□□□□ -1.73
Ccdc88aQ5SNZ0 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC4.25□□□□□ -1.73
Ccdc88aQ5SNZ0 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ccdc88aQ5SNZ0 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm11708-201ENSMUST00000119530 832 ntBASIC4.24□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm22890-201ENSMUST00000158642 144 ntBASIC4.24□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm18560-201ENSMUST00000173463 1123 ntBASIC4.24□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC4.24□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm5551-201ENSMUST00000199720 690 ntBASIC4.24□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm44927-201ENSMUST00000207573 716 ntBASIC4.24□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm35857-201ENSMUST00000212739 178 ntBASIC4.24□□□□□ -1.73
Ccdc88aQ5SNZ0 AC154598.1-201ENSMUST00000227079 347 ntBASIC4.24□□□□□ -1.73
Ccdc88aQ5SNZ0 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ccdc88aQ5SNZ0 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
Ccdc88aQ5SNZ0 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ccdc88aQ5SNZ0 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Ccdc88aQ5SNZ0 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
Ccdc88aQ5SNZ0 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Ccdc88aQ5SNZ0 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm13650-201ENSMUST00000117729 433 ntBASIC4.24□□□□□ -1.73
Ccdc88aQ5SNZ0 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC4.24□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm11869-201ENSMUST00000118701 329 ntBASIC4.24□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm14655-201ENSMUST00000120124 578 ntBASIC4.24□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC4.24□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC4.24□□□□□ -1.73
Ccdc88aQ5SNZ0 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm23123-201ENSMUST00000157648 144 ntBASIC4.24□□□□□ -1.73
Ccdc88aQ5SNZ0 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ccdc88aQ5SNZ0 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC4.24□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm6680-201ENSMUST00000192789 950 ntBASIC4.24□□□□□ -1.73
Ccdc88aQ5SNZ0 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC4.24□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm5176-201ENSMUST00000218244 1227 ntBASIC4.24□□□□□ -1.73
Ccdc88aQ5SNZ0 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Ccdc88aQ5SNZ0 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
Ccdc88aQ5SNZ0 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm42993-201ENSMUST00000196856 7325 ntBASIC4.23□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Ccdc88aQ5SNZ0 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC4.23□□□□□ -1.73
Ccdc88aQ5SNZ0 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Ccdc88aQ5SNZ0 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm11970-201ENSMUST00000116105 320 ntBASIC4.23□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm15986-201ENSMUST00000122153 400 ntBASIC4.23□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm24138-201ENSMUST00000157572 114 ntBASIC4.23□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm26088-201ENSMUST00000157896 131 ntBASIC4.23□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC4.23□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm38088-201ENSMUST00000195829 241 ntBASIC4.23□□□□□ -1.73
Ccdc88aQ5SNZ0 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
Ccdc88aQ5SNZ0 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm25205-201ENSMUST00000082841 103 ntBASIC4.23□□□□□ -1.73
Ccdc88aQ5SNZ0 Mir101b-201ENSMUST00000083622 97 ntBASIC4.23□□□□□ -1.73
Ccdc88aQ5SNZ0 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Ccdc88aQ5SNZ0 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
Ccdc88aQ5SNZ0 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Ccdc88aQ5SNZ0 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Ccdc88aQ5SNZ0 AC164102.1-201ENSMUST00000220524 1553 ntBASIC4.23□□□□□ -1.73
Ccdc88aQ5SNZ0 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ccdc88aQ5SNZ0 AC124572.2-201ENSMUST00000218041 5152 ntBASIC4.22□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm43881-201ENSMUST00000203051 2530 ntBASIC4.22□□□□□ -1.73
Ccdc88aQ5SNZ0 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm22538-201ENSMUST00000158169 299 ntBASIC4.22□□□□□ -1.73
Ccdc88aQ5SNZ0 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ccdc88aQ5SNZ0 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC4.22□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm44690-201ENSMUST00000207984 382 ntBASIC4.22□□□□□ -1.73
Ccdc88aQ5SNZ0 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.22□□□□□ -1.73
Ccdc88aQ5SNZ0 AC080021.1-201ENSMUST00000228104 700 ntBASIC4.22□□□□□ -1.73
Ccdc88aQ5SNZ0 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ccdc88aQ5SNZ0 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Ccdc88aQ5SNZ0 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Ccdc88aQ5SNZ0 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC4.22□□□□□ -1.73
Ccdc88aQ5SNZ0 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC4.22□□□□□ -1.73
Ccdc88aQ5SNZ0 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Ccdc88aQ5SNZ0 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ccdc88aQ5SNZ0 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ccdc88aQ5SNZ0 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm7853-201ENSMUST00000100708 478 ntBASIC4.22□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm12358-201ENSMUST00000121842 520 ntBASIC4.22□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
Ccdc88aQ5SNZ0 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC4.22□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm28148-201ENSMUST00000186924 697 ntBASIC4.22□□□□□ -1.73
Ccdc88aQ5SNZ0 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms