Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 AC158142.1-201ENSMUST00000226721 416 ntBASIC3.19□□□□□ -1.9
Trav5d-4Q5R1F6 AC137961.1-201ENSMUST00000227924 734 ntBASIC3.19□□□□□ -1.9
Trav5d-4Q5R1F6 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trav5d-4Q5R1F6 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC3.19□□□□□ -1.9
Trav5d-4Q5R1F6 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trav5d-4Q5R1F6 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trav5d-4Q5R1F6 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trav5d-4Q5R1F6 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Trav5d-4Q5R1F6 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Trav5d-4Q5R1F6 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Trav5d-4Q5R1F6 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC3.19□□□□□ -1.9
Trav5d-4Q5R1F6 Gm44624-201ENSMUST00000208700 2278 ntBASIC3.19□□□□□ -1.9
Trav5d-4Q5R1F6 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.19□□□□□ -1.9
Trav5d-4Q5R1F6 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC3.19□□□□□ -1.9
Trav5d-4Q5R1F6 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Trav5d-4Q5R1F6 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Igkv11-106-201ENSMUST00000103331 346 ntBASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Gm23273-201ENSMUST00000104058 135 ntBASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Gm14885-201ENSMUST00000117969 496 ntBASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Gm13314-201ENSMUST00000118742 335 ntBASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Gm9308-201ENSMUST00000119073 448 ntBASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Gm7219-201ENSMUST00000119619 297 ntBASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Gm15120-201ENSMUST00000120602 301 ntBASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Gm13788-201ENSMUST00000120767 601 ntBASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Gm13508-201ENSMUST00000121639 775 ntBASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Gm13419-201ENSMUST00000121711 271 ntBASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Gm22204-201ENSMUST00000122654 327 ntBASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Gm22588-201ENSMUST00000157510 140 ntBASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Gm25369-201ENSMUST00000158848 132 ntBASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Gm26219-201ENSMUST00000175216 71 ntBASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Mir713-201ENSMUST00000178651 108 ntBASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Mir6374-201ENSMUST00000184003 107 ntBASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Gm19774-201ENSMUST00000190667 114 ntBASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Gm5829-201ENSMUST00000191383 351 ntBASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Gm38283-201ENSMUST00000193041 695 ntBASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Mir142-201ENSMUST00000198092 64 ntBASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Gm18672-201ENSMUST00000208035 270 ntBASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Gm44869-201ENSMUST00000208836 357 ntBASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 AC153932.1-201ENSMUST00000218558 787 ntBASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Gm18387-201ENSMUST00000220333 702 ntBASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Gm15773-201ENSMUST00000118665 1448 ntBASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.18□□□□□ -1.9
Trav5d-4Q5R1F6 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Trav5d-4Q5R1F6 Gm43886-201ENSMUST00000205039 2386 ntBASIC3.17□□□□□ -1.9
Trav5d-4Q5R1F6 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Trav5d-4Q5R1F6 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Trav5d-4Q5R1F6 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
Trav5d-4Q5R1F6 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Trav5d-4Q5R1F6 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC3.17□□□□□ -1.9
Trav5d-4Q5R1F6 Gm7421-201ENSMUST00000119298 639 ntBASIC3.17□□□□□ -1.9
Trav5d-4Q5R1F6 Gm14926-201ENSMUST00000120650 508 ntBASIC3.17□□□□□ -1.9
Trav5d-4Q5R1F6 Gm1866-201ENSMUST00000120701 477 ntBASIC3.17□□□□□ -1.9
Trav5d-4Q5R1F6 Gm7365-201ENSMUST00000120877 639 ntBASIC3.17□□□□□ -1.9
Trav5d-4Q5R1F6 Gm13366-201ENSMUST00000122198 970 ntBASIC3.17□□□□□ -1.9
Trav5d-4Q5R1F6 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Trav5d-4Q5R1F6 Gm24059-201ENSMUST00000157493 312 ntBASIC3.17□□□□□ -1.9
Trav5d-4Q5R1F6 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC3.17□□□□□ -1.9
Trav5d-4Q5R1F6 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC3.17□□□□□ -1.9
Trav5d-4Q5R1F6 Gm22120-201ENSMUST00000175590 70 ntBASIC3.17□□□□□ -1.9
Trav5d-4Q5R1F6 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC3.17□□□□□ -1.9
Trav5d-4Q5R1F6 Gm27834-201ENSMUST00000183427 125 ntBASIC3.17□□□□□ -1.9
Trav5d-4Q5R1F6 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.17□□□□□ -1.9
Trav5d-4Q5R1F6 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.17□□□□□ -1.9
Trav5d-4Q5R1F6 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC3.17□□□□□ -1.9
Trav5d-4Q5R1F6 Gm38234-201ENSMUST00000195204 421 ntBASIC3.17□□□□□ -1.9
Trav5d-4Q5R1F6 Gm42453-201ENSMUST00000200477 409 ntBASIC3.17□□□□□ -1.9
Trav5d-4Q5R1F6 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC3.17□□□□□ -1.9
Trav5d-4Q5R1F6 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC3.17□□□□□ -1.9
Trav5d-4Q5R1F6 Gm17989-201ENSMUST00000211543 412 ntBASIC3.17□□□□□ -1.9
Trav5d-4Q5R1F6 Gm45796-201ENSMUST00000212483 114 ntBASIC3.17□□□□□ -1.9
Trav5d-4Q5R1F6 Gm18016-201ENSMUST00000216119 801 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 107 ms