Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm36247-201ENSMUST00000211834 285 ntBASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Trim40Q3UWA4 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.87□□□□□ -1.79
Trim40Q3UWA4 AC158392.1-201ENSMUST00000223720 1069 ntBASIC3.87□□□□□ -1.79
Trim40Q3UWA4 AC139750.2-201ENSMUST00000224424 386 ntBASIC3.87□□□□□ -1.79
Trim40Q3UWA4 AC160999.1-201ENSMUST00000225675 810 ntBASIC3.87□□□□□ -1.79
Trim40Q3UWA4 AC174459.2-201ENSMUST00000226036 160 ntBASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Trim40Q3UWA4 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Trim40Q3UWA4 AC123858.1-201ENSMUST00000226948 1874 ntBASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Gm20541-201ENSMUST00000173035 1406 ntBASIC3.87□□□□□ -1.79
Trim40Q3UWA4 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Gm22899-201ENSMUST00000104540 131 ntBASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Trim40Q3UWA4 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Gm15090-201ENSMUST00000118787 1196 ntBASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Gm11387-201ENSMUST00000120266 772 ntBASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Gm14927-201ENSMUST00000120283 454 ntBASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Gm13220-201ENSMUST00000121535 508 ntBASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Gm15089-201ENSMUST00000122332 1196 ntBASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Gm15367-201ENSMUST00000122398 1016 ntBASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Trim40Q3UWA4 V1rg10-201ENSMUST00000183378 937 ntBASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Gm27733-201ENSMUST00000184803 68 ntBASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Gm29038-201ENSMUST00000191543 678 ntBASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Gm42991-201ENSMUST00000196468 3837 ntBASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Gm8458-201ENSMUST00000196658 819 ntBASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Gm43494-201ENSMUST00000197672 388 ntBASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Gm43368-201ENSMUST00000200638 409 ntBASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Gm44946-201ENSMUST00000208425 572 ntBASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Gm5339-201ENSMUST00000210551 1102 ntBASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Supt4b-201ENSMUST00000214434 351 ntBASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC3.86□□□□□ -1.79
Trim40Q3UWA4 AC131677.1-201ENSMUST00000218721 535 ntBASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Gm9616-201ENSMUST00000221154 781 ntBASIC3.86□□□□□ -1.79
Trim40Q3UWA4 AC170086.1-201ENSMUST00000225190 497 ntBASIC3.86□□□□□ -1.79
Trim40Q3UWA4 AC156574.2-201ENSMUST00000228023 282 ntBASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Apoo-ps-201ENSMUST00000061241 586 ntBASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Gm7381-201ENSMUST00000098958 300 ntBASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Trim40Q3UWA4 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Trim40Q3UWA4 Gm37478-201ENSMUST00000193624 3495 ntBASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Gm23226-201ENSMUST00000116927 103 ntBASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Gm15206-201ENSMUST00000119143 454 ntBASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Gm7421-201ENSMUST00000119298 639 ntBASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Gm7365-201ENSMUST00000120877 639 ntBASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Gm12881-201ENSMUST00000121191 203 ntBASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC3.85□□□□□ -1.79
Trim40Q3UWA4 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Mup-ps4-201ENSMUST00000151005 539 ntBASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Gm27896-201ENSMUST00000175162 317 ntBASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Gm21809-201ENSMUST00000178495 468 ntBASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Gm17412-201ENSMUST00000179261 468 ntBASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Gm33973-201ENSMUST00000195148 534 ntBASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Gm3933-201ENSMUST00000195391 439 ntBASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC3.85□□□□□ -1.79
Trim40Q3UWA4 CT573422.1-201ENSMUST00000216655 405 ntBASIC3.85□□□□□ -1.79
Trim40Q3UWA4 AC153544.1-201ENSMUST00000217988 400 ntBASIC3.85□□□□□ -1.79
Trim40Q3UWA4 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC3.85□□□□□ -1.79
Trim40Q3UWA4 AC140210.1-201ENSMUST00000224961 534 ntBASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Trim40Q3UWA4 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Trim40Q3UWA4 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms