Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm25456-201ENSMUST00000157952 109 ntBASIC4.08□□□□□ -1.76
Upf3aQ3ULJ3 Gm17091-201ENSMUST00000163248 357 ntBASIC4.08□□□□□ -1.76
Upf3aQ3ULJ3 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Upf3aQ3ULJ3 Gm21742-201ENSMUST00000189352 548 ntBASIC4.08□□□□□ -1.76
Upf3aQ3ULJ3 Gm38260-201ENSMUST00000193573 3995 ntBASIC4.08□□□□□ -1.76
Upf3aQ3ULJ3 Gm43491-201ENSMUST00000197133 784 ntBASIC4.08□□□□□ -1.76
Upf3aQ3ULJ3 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Upf3aQ3ULJ3 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Upf3aQ3ULJ3 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC4.08□□□□□ -1.76
Upf3aQ3ULJ3 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Upf3aQ3ULJ3 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
Upf3aQ3ULJ3 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Upf3aQ3ULJ3 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Upf3aQ3ULJ3 AC132465.3-201ENSMUST00000219326 195 ntBASIC4.08□□□□□ -1.76
Upf3aQ3ULJ3 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Upf3aQ3ULJ3 AC132237.2-201ENSMUST00000221702 1209 ntBASIC4.08□□□□□ -1.76
Upf3aQ3ULJ3 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC4.08□□□□□ -1.76
Upf3aQ3ULJ3 AC124581.4-201ENSMUST00000225874 463 ntBASIC4.08□□□□□ -1.76
Upf3aQ3ULJ3 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Upf3aQ3ULJ3 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Upf3aQ3ULJ3 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Upf3aQ3ULJ3 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.08□□□□□ -1.76
Upf3aQ3ULJ3 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Upf3aQ3ULJ3 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Upf3aQ3ULJ3 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Upf3aQ3ULJ3 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Upf3aQ3ULJ3 Gm44286-201ENSMUST00000204098 1487 ntBASIC4.07□□□□□ -1.76
Upf3aQ3ULJ3 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Upf3aQ3ULJ3 Gm37407-201ENSMUST00000194793 1316 ntBASIC4.07□□□□□ -1.76
Upf3aQ3ULJ3 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Upf3aQ3ULJ3 Gm25272-201ENSMUST00000104293 128 ntBASIC4.07□□□□□ -1.76
Upf3aQ3ULJ3 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Upf3aQ3ULJ3 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC4.07□□□□□ -1.76
Upf3aQ3ULJ3 Gm14621-201ENSMUST00000117709 689 ntBASIC4.07□□□□□ -1.76
Upf3aQ3ULJ3 Mup-ps21-201ENSMUST00000119998 448 ntBASIC4.07□□□□□ -1.76
Upf3aQ3ULJ3 Gm14687-201ENSMUST00000120206 363 ntBASIC4.07□□□□□ -1.76
Upf3aQ3ULJ3 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC4.07□□□□□ -1.76
Upf3aQ3ULJ3 Gm23168-201ENSMUST00000157156 143 ntBASIC4.07□□□□□ -1.76
Upf3aQ3ULJ3 Gm23441-201ENSMUST00000157268 127 ntBASIC4.07□□□□□ -1.76
Upf3aQ3ULJ3 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Upf3aQ3ULJ3 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Upf3aQ3ULJ3 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Upf3aQ3ULJ3 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Upf3aQ3ULJ3 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC4.07□□□□□ -1.76
Upf3aQ3ULJ3 Gm37617-201ENSMUST00000194309 159 ntBASIC4.07□□□□□ -1.76
Upf3aQ3ULJ3 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.07□□□□□ -1.76
Upf3aQ3ULJ3 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Upf3aQ3ULJ3 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC4.07□□□□□ -1.76
Upf3aQ3ULJ3 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC4.07□□□□□ -1.76
Upf3aQ3ULJ3 Gnrh1-202ENSMUST00000223929 428 ntBASIC4.07□□□□□ -1.76
Upf3aQ3ULJ3 AC133101.1-201ENSMUST00000226939 1199 ntBASIC4.07□□□□□ -1.76
Upf3aQ3ULJ3 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Upf3aQ3ULJ3 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Upf3aQ3ULJ3 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Upf3aQ3ULJ3 Gm42455-201ENSMUST00000199761 2736 ntBASIC4.07□□□□□ -1.76
Upf3aQ3ULJ3 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Upf3aQ3ULJ3 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Upf3aQ3ULJ3 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Upf3aQ3ULJ3 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Upf3aQ3ULJ3 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.06□□□□□ -1.76
Upf3aQ3ULJ3 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.06□□□□□ -1.76
Upf3aQ3ULJ3 Gm37777-201ENSMUST00000195546 3366 ntBASIC4.06□□□□□ -1.76
Upf3aQ3ULJ3 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.06□□□□□ -1.76
Upf3aQ3ULJ3 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Upf3aQ3ULJ3 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC4.06□□□□□ -1.76
Upf3aQ3ULJ3 Gm14739-201ENSMUST00000120424 802 ntBASIC4.06□□□□□ -1.76
Upf3aQ3ULJ3 Gm15780-201ENSMUST00000121283 935 ntBASIC4.06□□□□□ -1.76
Upf3aQ3ULJ3 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC4.06□□□□□ -1.76
Upf3aQ3ULJ3 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Upf3aQ3ULJ3 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Upf3aQ3ULJ3 Gm25553-201ENSMUST00000158076 79 ntBASIC4.06□□□□□ -1.76
Upf3aQ3ULJ3 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
Upf3aQ3ULJ3 Gm29334-201ENSMUST00000190334 357 ntBASIC4.06□□□□□ -1.76
Upf3aQ3ULJ3 Gm7299-201ENSMUST00000194441 581 ntBASIC4.06□□□□□ -1.76
Upf3aQ3ULJ3 Gm43371-201ENSMUST00000202838 1031 ntBASIC4.06□□□□□ -1.76
Upf3aQ3ULJ3 Gm18944-201ENSMUST00000207672 643 ntBASIC4.06□□□□□ -1.76
Upf3aQ3ULJ3 Gm44681-201ENSMUST00000208447 842 ntBASIC4.06□□□□□ -1.76
Upf3aQ3ULJ3 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Upf3aQ3ULJ3 Gm8106-201ENSMUST00000213123 523 ntBASIC4.06□□□□□ -1.76
Upf3aQ3ULJ3 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC4.06□□□□□ -1.76
Upf3aQ3ULJ3 Mir28a-201ENSMUST00000083560 86 ntBASIC4.06□□□□□ -1.76
Upf3aQ3ULJ3 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Upf3aQ3ULJ3 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC4.06□□□□□ -1.76
Upf3aQ3ULJ3 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
Upf3aQ3ULJ3 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Upf3aQ3ULJ3 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
Upf3aQ3ULJ3 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
Upf3aQ3ULJ3 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Upf3aQ3ULJ3 Gm42537-201ENSMUST00000198260 2574 ntBASIC4.06□□□□□ -1.76
Upf3aQ3ULJ3 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Upf3aQ3ULJ3 Gm43443-201ENSMUST00000202337 2393 ntBASIC4.05□□□□□ -1.76
Upf3aQ3ULJ3 AC159193.2-201ENSMUST00000220865 4251 ntBASIC4.05□□□□□ -1.76
Upf3aQ3ULJ3 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Upf3aQ3ULJ3 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Upf3aQ3ULJ3 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Upf3aQ3ULJ3 Gm43870-201ENSMUST00000205102 4369 ntBASIC4.05□□□□□ -1.76
Upf3aQ3ULJ3 Gm24067-201ENSMUST00000104514 85 ntBASIC4.05□□□□□ -1.76
Upf3aQ3ULJ3 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
Upf3aQ3ULJ3 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC4.05□□□□□ -1.76
Upf3aQ3ULJ3 Gm8475-201ENSMUST00000118211 526 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms