Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Pfdn6Q03958 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC3.67□□□□□ -1.82
Pfdn6Q03958 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Pfdn6Q03958 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Pfdn6Q03958 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.67□□□□□ -1.82
Pfdn6Q03958 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.67□□□□□ -1.82
Pfdn6Q03958 Gm20693-201ENSMUST00000177431 211 ntBASIC3.67□□□□□ -1.82
Pfdn6Q03958 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.67□□□□□ -1.82
Pfdn6Q03958 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC3.67□□□□□ -1.82
Pfdn6Q03958 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Pfdn6Q03958 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.67□□□□□ -1.82
Pfdn6Q03958 Gm44817-201ENSMUST00000205416 453 ntBASIC3.67□□□□□ -1.82
Pfdn6Q03958 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.67□□□□□ -1.82
Pfdn6Q03958 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC3.67□□□□□ -1.82
Pfdn6Q03958 AC132315.1-201ENSMUST00000221771 390 ntBASIC3.67□□□□□ -1.82
Pfdn6Q03958 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Pfdn6Q03958 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Pfdn6Q03958 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Pfdn6Q03958 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Pfdn6Q03958 Snord15a-201ENSMUST00000083888 148 ntBASIC3.67□□□□□ -1.82
Pfdn6Q03958 Gm5518-201ENSMUST00000084171 648 ntBASIC3.67□□□□□ -1.82
Pfdn6Q03958 Gm10242-201ENSMUST00000090064 330 ntBASIC3.67□□□□□ -1.82
Pfdn6Q03958 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Pfdn6Q03958 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Pfdn6Q03958 Gm42484-201ENSMUST00000196075 2104 ntBASIC3.67□□□□□ -1.82
Pfdn6Q03958 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Pfdn6Q03958 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.67□□□□□ -1.82
Pfdn6Q03958 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Pfdn6Q03958 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Pfdn6Q03958 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Pfdn6Q03958 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Pfdn6Q03958 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Pfdn6Q03958 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Pfdn6Q03958 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Pfdn6Q03958 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC3.66□□□□□ -1.82
Pfdn6Q03958 Gm12788-201ENSMUST00000119090 308 ntBASIC3.66□□□□□ -1.82
Pfdn6Q03958 Gm5942-201ENSMUST00000120046 439 ntBASIC3.66□□□□□ -1.82
Pfdn6Q03958 Gm11387-201ENSMUST00000120266 772 ntBASIC3.66□□□□□ -1.82
Pfdn6Q03958 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC3.66□□□□□ -1.82
Pfdn6Q03958 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.66□□□□□ -1.82
Pfdn6Q03958 Gm23112-201ENSMUST00000158606 125 ntBASIC3.66□□□□□ -1.82
Pfdn6Q03958 Gm16290-201ENSMUST00000161175 474 ntBASIC3.66□□□□□ -1.82
Pfdn6Q03958 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Pfdn6Q03958 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC3.66□□□□□ -1.82
Pfdn6Q03958 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Pfdn6Q03958 Gm42824-201ENSMUST00000199361 247 ntBASIC3.66□□□□□ -1.82
Pfdn6Q03958 Gm2314-201ENSMUST00000200391 586 ntBASIC3.66□□□□□ -1.82
Pfdn6Q03958 Gm44650-201ENSMUST00000206929 194 ntBASIC3.66□□□□□ -1.82
Pfdn6Q03958 Gm44869-201ENSMUST00000208836 357 ntBASIC3.66□□□□□ -1.82
Pfdn6Q03958 Gm45690-201ENSMUST00000210775 246 ntBASIC3.66□□□□□ -1.82
Pfdn6Q03958 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC3.66□□□□□ -1.82
Pfdn6Q03958 Gm35857-201ENSMUST00000212739 178 ntBASIC3.66□□□□□ -1.82
Pfdn6Q03958 AC133598.4-202ENSMUST00000225267 469 ntBASIC3.66□□□□□ -1.82
Pfdn6Q03958 AC154838.1-201ENSMUST00000228944 911 ntBASIC3.66□□□□□ -1.82
Pfdn6Q03958 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Pfdn6Q03958 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.66□□□□□ -1.82
Pfdn6Q03958 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Pfdn6Q03958 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Pfdn6Q03958 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Pfdn6Q03958 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.66□□□□□ -1.82
Pfdn6Q03958 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Pfdn6Q03958 Gm44435-201ENSMUST00000204379 4119 ntBASIC3.66□□□□□ -1.82
Pfdn6Q03958 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Pfdn6Q03958 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Pfdn6Q03958 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Pfdn6Q03958 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.66□□□□□ -1.82
Pfdn6Q03958 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Pfdn6Q03958 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Pfdn6Q03958 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Pfdn6Q03958 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Pfdn6Q03958 Gm18422-202ENSMUST00000203798 2214 ntBASIC3.65□□□□□ -1.83
Pfdn6Q03958 Gm11372-201ENSMUST00000117348 570 ntBASIC3.65□□□□□ -1.83
Pfdn6Q03958 Gm14570-201ENSMUST00000119444 391 ntBASIC3.65□□□□□ -1.83
Pfdn6Q03958 Gm11704-201ENSMUST00000120031 214 ntBASIC3.65□□□□□ -1.83
Pfdn6Q03958 Gm14037-201ENSMUST00000120576 313 ntBASIC3.65□□□□□ -1.83
Pfdn6Q03958 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC3.65□□□□□ -1.83
Pfdn6Q03958 Gm24059-201ENSMUST00000157493 312 ntBASIC3.65□□□□□ -1.83
Pfdn6Q03958 Gm28594-201ENSMUST00000187022 661 ntBASIC3.65□□□□□ -1.83
Pfdn6Q03958 Gm5829-201ENSMUST00000191383 351 ntBASIC3.65□□□□□ -1.83
Pfdn6Q03958 Gm5339-201ENSMUST00000210551 1102 ntBASIC3.65□□□□□ -1.83
Pfdn6Q03958 Gm5373-201ENSMUST00000212113 1050 ntBASIC3.65□□□□□ -1.83
Pfdn6Q03958 AC158523.2-201ENSMUST00000222708 548 ntBASIC3.65□□□□□ -1.83
Pfdn6Q03958 AC154441.1-201ENSMUST00000223653 1006 ntBASIC3.65□□□□□ -1.83
Pfdn6Q03958 AC124581.4-201ENSMUST00000225874 463 ntBASIC3.65□□□□□ -1.83
Pfdn6Q03958 AC130673.2-201ENSMUST00000228091 797 ntBASIC3.65□□□□□ -1.83
Pfdn6Q03958 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Pfdn6Q03958 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Pfdn6Q03958 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Pfdn6Q03958 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Pfdn6Q03958 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Pfdn6Q03958 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.65□□□□□ -1.83
Pfdn6Q03958 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Pfdn6Q03958 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
Pfdn6Q03958 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Pfdn6Q03958 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.65□□□□□ -1.83
Pfdn6Q03958 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Pfdn6Q03958 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
Pfdn6Q03958 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Pfdn6Q03958 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Pfdn6Q03958 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.64□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 166.6 ms