Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col8a1Q00780 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col8a1Q00780 Gm37760-201ENSMUST00000194726 3841 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col8a1Q00780 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Col8a1Q00780 CT009480.3-201ENSMUST00000224051 3032 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 AC116557.1-201ENSMUST00000219494 1521 ntBASIC4.67□□□□□ -1.66
Col8a1Q00780 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Col8a1Q00780 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col8a1Q00780 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col8a1Q00780 Gm43025-201ENSMUST00000201764 1886 ntBASIC4.66□□□□□ -1.66
Col8a1Q00780 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Col8a1Q00780 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Col8a1Q00780 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col8a1Q00780 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col8a1Q00780 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col8a1Q00780 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Col8a1Q00780 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Col8a1Q00780 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC4.66□□□□□ -1.66
Col8a1Q00780 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Col8a1Q00780 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Col8a1Q00780 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC4.66□□□□□ -1.66
Col8a1Q00780 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC4.66□□□□□ -1.66
Col8a1Q00780 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col8a1Q00780 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col8a1Q00780 Gm15670-201ENSMUST00000117740 447 ntBASIC4.66□□□□□ -1.66
Col8a1Q00780 Gm11784-201ENSMUST00000118568 474 ntBASIC4.66□□□□□ -1.66
Col8a1Q00780 Clec2f-201ENSMUST00000121051 374 ntBASIC4.66□□□□□ -1.66
Col8a1Q00780 Gm23332-201ENSMUST00000157424 275 ntBASIC4.66□□□□□ -1.66
Col8a1Q00780 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC4.66□□□□□ -1.66
Col8a1Q00780 Mir5128-201ENSMUST00000175217 84 ntBASIC4.66□□□□□ -1.66
Col8a1Q00780 Gm8532-201ENSMUST00000179174 461 ntBASIC4.66□□□□□ -1.66
Col8a1Q00780 Gm21726-201ENSMUST00000179654 392 ntBASIC4.66□□□□□ -1.66
Col8a1Q00780 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC4.66□□□□□ -1.66
Col8a1Q00780 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC4.66□□□□□ -1.66
Col8a1Q00780 Gm9687-201ENSMUST00000189312 602 ntBASIC4.66□□□□□ -1.66
Col8a1Q00780 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC4.66□□□□□ -1.66
Col8a1Q00780 Gm37455-201ENSMUST00000191993 529 ntBASIC4.66□□□□□ -1.66
Col8a1Q00780 Gm20162-201ENSMUST00000193629 871 ntBASIC4.66□□□□□ -1.66
Col8a1Q00780 Gm37882-201ENSMUST00000195254 196 ntBASIC4.66□□□□□ -1.66
Col8a1Q00780 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC4.66□□□□□ -1.66
Col8a1Q00780 Gm44634-201ENSMUST00000206119 152 ntBASIC4.66□□□□□ -1.66
Col8a1Q00780 Gm2676-201ENSMUST00000207279 606 ntBASIC4.66□□□□□ -1.66
Col8a1Q00780 Gm6009-201ENSMUST00000210848 280 ntBASIC4.66□□□□□ -1.66
Col8a1Q00780 AC162387.1-201ENSMUST00000213369 213 ntBASIC4.66□□□□□ -1.66
Col8a1Q00780 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC4.66□□□□□ -1.66
Col8a1Q00780 Gm8231-201ENSMUST00000221617 783 ntBASIC4.66□□□□□ -1.66
Col8a1Q00780 AC154335.1-201ENSMUST00000224744 395 ntBASIC4.66□□□□□ -1.66
Col8a1Q00780 CT573086.3-201ENSMUST00000228762 594 ntBASIC4.66□□□□□ -1.66
Col8a1Q00780 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Col8a1Q00780 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Col8a1Q00780 Gm24037-201ENSMUST00000082871 180 ntBASIC4.66□□□□□ -1.66
Col8a1Q00780 Gm22826-201ENSMUST00000083774 165 ntBASIC4.66□□□□□ -1.66
Col8a1Q00780 Gm22350-201ENSMUST00000083924 156 ntBASIC4.66□□□□□ -1.66
Col8a1Q00780 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC4.66□□□□□ -1.66
Col8a1Q00780 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col8a1Q00780 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Col8a1Q00780 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col8a1Q00780 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col8a1Q00780 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col8a1Q00780 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
Col8a1Q00780 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Col8a1Q00780 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col8a1Q00780 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Col8a1Q00780 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col8a1Q00780 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Col8a1Q00780 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col8a1Q00780 LOC102637012-201ENSMUST00000217248 2562 ntBASIC4.65□□□□□ -1.66
Col8a1Q00780 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Col8a1Q00780 Gm37717-201ENSMUST00000192647 3027 ntBASIC4.65□□□□□ -1.66
Col8a1Q00780 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
Col8a1Q00780 AC153912.2-201ENSMUST00000215840 2015 ntBASIC4.65□□□□□ -1.66
Col8a1Q00780 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Col8a1Q00780 Gm45632-201ENSMUST00000211532 1888 ntBASIC4.65□□□□□ -1.66
Col8a1Q00780 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Col8a1Q00780 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Col8a1Q00780 Gm16431-201ENSMUST00000117454 431 ntBASIC4.65□□□□□ -1.67
Col8a1Q00780 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC4.65□□□□□ -1.67
Col8a1Q00780 Gm14605-201ENSMUST00000120599 268 ntBASIC4.65□□□□□ -1.67
Col8a1Q00780 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC4.65□□□□□ -1.67
Col8a1Q00780 Gm25665-201ENSMUST00000157695 110 ntBASIC4.65□□□□□ -1.67
Col8a1Q00780 Gm22789-201ENSMUST00000157884 130 ntBASIC4.65□□□□□ -1.67
Col8a1Q00780 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Col8a1Q00780 Gm21978-201ENSMUST00000179696 377 ntBASIC4.65□□□□□ -1.67
Col8a1Q00780 Gm27551-201ENSMUST00000184258 77 ntBASIC4.65□□□□□ -1.67
Col8a1Q00780 Gm27694-201ENSMUST00000184740 86 ntBASIC4.65□□□□□ -1.67
Col8a1Q00780 Zfp-ps-201ENSMUST00000185025 478 ntBASIC4.65□□□□□ -1.67
Col8a1Q00780 Gm27760-201ENSMUST00000185048 114 ntBASIC4.65□□□□□ -1.67
Col8a1Q00780 Gm43070-201ENSMUST00000196938 415 ntBASIC4.65□□□□□ -1.67
Col8a1Q00780 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Col8a1Q00780 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Col8a1Q00780 Gm45081-201ENSMUST00000206281 572 ntBASIC4.65□□□□□ -1.67
Col8a1Q00780 Gm10988-201ENSMUST00000209150 1088 ntBASIC4.65□□□□□ -1.67
Col8a1Q00780 Gm18258-201ENSMUST00000210413 542 ntBASIC4.65□□□□□ -1.67
Col8a1Q00780 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Col8a1Q00780 AC132437.1-201ENSMUST00000218308 320 ntBASIC4.65□□□□□ -1.67
Col8a1Q00780 AC170999.2-201ENSMUST00000226223 264 ntBASIC4.65□□□□□ -1.67
Col8a1Q00780 AC158955.1-201ENSMUST00000227140 385 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms