Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm5263-201ENSMUST00000163646 601 ntBASIC4.6□□□□□ -1.67
CiitaP79621 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CiitaP79621 Gm18354-201ENSMUST00000173515 1068 ntBASIC4.6□□□□□ -1.67
CiitaP79621 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC4.6□□□□□ -1.67
CiitaP79621 Gm17953-201ENSMUST00000192061 667 ntBASIC4.6□□□□□ -1.67
CiitaP79621 Gm37501-201ENSMUST00000192830 691 ntBASIC4.6□□□□□ -1.67
CiitaP79621 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC4.6□□□□□ -1.67
CiitaP79621 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC4.6□□□□□ -1.67
CiitaP79621 Gm28724-202ENSMUST00000194218 295 ntBASIC4.6□□□□□ -1.67
CiitaP79621 Gm44650-201ENSMUST00000206929 194 ntBASIC4.6□□□□□ -1.67
CiitaP79621 Gm4501-201ENSMUST00000207330 551 ntBASIC4.6□□□□□ -1.67
CiitaP79621 Gm4558-201ENSMUST00000207886 521 ntBASIC4.6□□□□□ -1.67
CiitaP79621 Gm4528-201ENSMUST00000207905 551 ntBASIC4.6□□□□□ -1.67
CiitaP79621 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CiitaP79621 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC4.6□□□□□ -1.67
CiitaP79621 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.6□□□□□ -1.67
CiitaP79621 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CiitaP79621 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CiitaP79621 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CiitaP79621 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CiitaP79621 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CiitaP79621 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CiitaP79621 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CiitaP79621 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CiitaP79621 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CiitaP79621 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
CiitaP79621 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CiitaP79621 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
CiitaP79621 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CiitaP79621 AC147615.2-201ENSMUST00000219876 2154 ntBASIC4.6□□□□□ -1.67
CiitaP79621 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CiitaP79621 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CiitaP79621 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CiitaP79621 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CiitaP79621 Gm25317-201ENSMUST00000116824 129 ntBASIC4.59□□□□□ -1.67
CiitaP79621 Gm14050-201ENSMUST00000117052 346 ntBASIC4.59□□□□□ -1.67
CiitaP79621 Gm11432-201ENSMUST00000117334 231 ntBASIC4.59□□□□□ -1.67
CiitaP79621 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CiitaP79621 Gm15926-201ENSMUST00000120492 550 ntBASIC4.59□□□□□ -1.67
CiitaP79621 Gm17038-201ENSMUST00000166586 494 ntBASIC4.59□□□□□ -1.67
CiitaP79621 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CiitaP79621 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CiitaP79621 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.59□□□□□ -1.67
CiitaP79621 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC4.59□□□□□ -1.67
CiitaP79621 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CiitaP79621 Gm8790-201ENSMUST00000194108 322 ntBASIC4.59□□□□□ -1.67
CiitaP79621 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC4.59□□□□□ -1.67
CiitaP79621 Gm36259-201ENSMUST00000197340 392 ntBASIC4.59□□□□□ -1.67
CiitaP79621 Gm43730-201ENSMUST00000199863 372 ntBASIC4.59□□□□□ -1.67
CiitaP79621 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC4.59□□□□□ -1.67
CiitaP79621 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.59□□□□□ -1.67
CiitaP79621 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CiitaP79621 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
CiitaP79621 AC158641.1-201ENSMUST00000218933 229 ntBASIC4.59□□□□□ -1.67
CiitaP79621 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC4.59□□□□□ -1.67
CiitaP79621 Gm7093-201ENSMUST00000223004 581 ntBASIC4.59□□□□□ -1.67
CiitaP79621 AC127371.1-201ENSMUST00000228516 312 ntBASIC4.59□□□□□ -1.67
CiitaP79621 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CiitaP79621 Gm10356-201ENSMUST00000097152 1258 ntBASIC4.59□□□□□ -1.67
CiitaP79621 Gm37626-201ENSMUST00000194332 4563 ntBASIC4.59□□□□□ -1.68
CiitaP79621 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.68
CiitaP79621 Gm43201-201ENSMUST00000195925 3416 ntBASIC4.59□□□□□ -1.68
CiitaP79621 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC4.59□□□□□ -1.68
CiitaP79621 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
CiitaP79621 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CiitaP79621 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.58□□□□□ -1.68
CiitaP79621 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CiitaP79621 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CiitaP79621 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CiitaP79621 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CiitaP79621 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CiitaP79621 Fbxw23-202ENSMUST00000198480 1388 ntBASIC4.58□□□□□ -1.68
CiitaP79621 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CiitaP79621 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CiitaP79621 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CiitaP79621 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CiitaP79621 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CiitaP79621 Gm15148-201ENSMUST00000117602 156 ntBASIC4.58□□□□□ -1.68
CiitaP79621 Gm12173-201ENSMUST00000117622 273 ntBASIC4.58□□□□□ -1.68
CiitaP79621 Mup-ps13-201ENSMUST00000120662 545 ntBASIC4.58□□□□□ -1.68
CiitaP79621 Mup-ps1-201ENSMUST00000120720 544 ntBASIC4.58□□□□□ -1.68
CiitaP79621 Gm12087-201ENSMUST00000121878 258 ntBASIC4.58□□□□□ -1.68
CiitaP79621 Gm13676-201ENSMUST00000122185 591 ntBASIC4.58□□□□□ -1.68
CiitaP79621 Gm2892-201ENSMUST00000145537 711 ntBASIC4.58□□□□□ -1.68
CiitaP79621 Gm26001-201ENSMUST00000157989 103 ntBASIC4.58□□□□□ -1.68
CiitaP79621 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC4.58□□□□□ -1.68
CiitaP79621 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CiitaP79621 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CiitaP79621 Gm22252-201ENSMUST00000179316 79 ntBASIC4.58□□□□□ -1.68
CiitaP79621 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CiitaP79621 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC4.58□□□□□ -1.68
CiitaP79621 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC4.58□□□□□ -1.68
CiitaP79621 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC4.58□□□□□ -1.68
CiitaP79621 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CiitaP79621 Gm18984-201ENSMUST00000193998 1124 ntBASIC4.58□□□□□ -1.68
CiitaP79621 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC4.58□□□□□ -1.68
CiitaP79621 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC4.58□□□□□ -1.68
CiitaP79621 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CiitaP79621 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC4.58□□□□□ -1.68
CiitaP79621 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC4.58□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms