Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hmgb1P63158 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hmgb1P63158 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Hmgb1P63158 Gm11429-201ENSMUST00000119089 144 ntBASIC5.42□□□□□ -1.54
Hmgb1P63158 Gm12607-201ENSMUST00000120724 493 ntBASIC5.42□□□□□ -1.54
Hmgb1P63158 Gm14601-201ENSMUST00000120892 236 ntBASIC5.42□□□□□ -1.54
Hmgb1P63158 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC5.42□□□□□ -1.54
Hmgb1P63158 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Hmgb1P63158 Gm11507-201ENSMUST00000156462 412 ntBASIC5.42□□□□□ -1.54
Hmgb1P63158 Mir6973b-201ENSMUST00000184185 80 ntBASIC5.42□□□□□ -1.54
Hmgb1P63158 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC5.42□□□□□ -1.54
Hmgb1P63158 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC5.42□□□□□ -1.54
Hmgb1P63158 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Hmgb1P63158 Gm44048-201ENSMUST00000204531 361 ntBASIC5.42□□□□□ -1.54
Hmgb1P63158 Gm17766-201ENSMUST00000209223 442 ntBASIC5.42□□□□□ -1.54
Hmgb1P63158 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
Hmgb1P63158 Gm23330-201ENSMUST00000082660 164 ntBASIC5.42□□□□□ -1.54
Hmgb1P63158 Gm23459-201ENSMUST00000083259 131 ntBASIC5.42□□□□□ -1.54
Hmgb1P63158 Gm25821-201ENSMUST00000093657 133 ntBASIC5.42□□□□□ -1.54
Hmgb1P63158 Gm18180-201ENSMUST00000187562 1484 ntBASIC5.42□□□□□ -1.54
Hmgb1P63158 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Hmgb1P63158 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
Hmgb1P63158 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hmgb1P63158 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hmgb1P63158 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hmgb1P63158 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Hmgb1P63158 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC5.41□□□□□ -1.54
Hmgb1P63158 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Hmgb1P63158 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Hmgb1P63158 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Hmgb1P63158 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Hmgb1P63158 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Hmgb1P63158 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC5.41□□□□□ -1.54
Hmgb1P63158 Gm6664-201ENSMUST00000119138 468 ntBASIC5.41□□□□□ -1.54
Hmgb1P63158 Gm11693-201ENSMUST00000119625 565 ntBASIC5.41□□□□□ -1.54
Hmgb1P63158 Llph-ps2-201ENSMUST00000122000 393 ntBASIC5.41□□□□□ -1.54
Hmgb1P63158 Gm24380-201ENSMUST00000122696 324 ntBASIC5.41□□□□□ -1.54
Hmgb1P63158 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC5.41□□□□□ -1.54
Hmgb1P63158 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC5.41□□□□□ -1.54
Hmgb1P63158 Gm17154-201ENSMUST00000165748 431 ntBASIC5.41□□□□□ -1.54
Hmgb1P63158 Gm2497-201ENSMUST00000189539 601 ntBASIC5.41□□□□□ -1.54
Hmgb1P63158 Gm19620-201ENSMUST00000195972 434 ntBASIC5.41□□□□□ -1.54
Hmgb1P63158 Gm44274-201ENSMUST00000203417 256 ntBASIC5.41□□□□□ -1.54
Hmgb1P63158 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC5.41□□□□□ -1.54
Hmgb1P63158 Gm44720-201ENSMUST00000206076 260 ntBASIC5.41□□□□□ -1.54
Hmgb1P63158 AC142273.1-201ENSMUST00000213723 673 ntBASIC5.41□□□□□ -1.54
Hmgb1P63158 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC5.41□□□□□ -1.54
Hmgb1P63158 AC154840.1-201ENSMUST00000225216 408 ntBASIC5.41□□□□□ -1.54
Hmgb1P63158 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hmgb1P63158 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Hmgb1P63158 n-R5s3-201ENSMUST00000083879 112 ntBASIC5.41□□□□□ -1.54
Hmgb1P63158 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Hmgb1P63158 Gm9386-201ENSMUST00000095195 381 ntBASIC5.41□□□□□ -1.54
Hmgb1P63158 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Hmgb1P63158 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC5.41□□□□□ -1.54
Hmgb1P63158 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hmgb1P63158 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Hmgb1P63158 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hmgb1P63158 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Hmgb1P63158 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hmgb1P63158 Gm18594-201ENSMUST00000175733 1403 ntBASIC5.4□□□□□ -1.54
Hmgb1P63158 Gm37868-201ENSMUST00000195578 2735 ntBASIC5.4□□□□□ -1.54
Hmgb1P63158 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Hmgb1P63158 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Hmgb1P63158 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Hmgb1P63158 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Hmgb1P63158 Gm25758-201ENSMUST00000103987 129 ntBASIC5.4□□□□□ -1.54
Hmgb1P63158 Gm23274-201ENSMUST00000104056 130 ntBASIC5.4□□□□□ -1.54
Hmgb1P63158 Gm25418-201ENSMUST00000104214 129 ntBASIC5.4□□□□□ -1.54
Hmgb1P63158 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Hmgb1P63158 Mir467h-201ENSMUST00000116759 121 ntBASIC5.4□□□□□ -1.54
Hmgb1P63158 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Hmgb1P63158 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC5.4□□□□□ -1.54
Hmgb1P63158 Gm11481-201ENSMUST00000120069 255 ntBASIC5.4□□□□□ -1.54
Hmgb1P63158 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC5.4□□□□□ -1.54
Hmgb1P63158 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC5.4□□□□□ -1.54
Hmgb1P63158 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Hmgb1P63158 Gm25660-201ENSMUST00000158470 104 ntBASIC5.4□□□□□ -1.54
Hmgb1P63158 Gm25714-201ENSMUST00000158626 296 ntBASIC5.4□□□□□ -1.54
Hmgb1P63158 Gm24675-201ENSMUST00000158757 259 ntBASIC5.4□□□□□ -1.54
Hmgb1P63158 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Hmgb1P63158 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC5.4□□□□□ -1.54
Hmgb1P63158 Gm5777-201ENSMUST00000177265 448 ntBASIC5.4□□□□□ -1.54
Hmgb1P63158 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC5.4□□□□□ -1.54
Hmgb1P63158 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
Hmgb1P63158 Mir6416-201ENSMUST00000183664 117 ntBASIC5.4□□□□□ -1.54
Hmgb1P63158 Gm28412-201ENSMUST00000187243 177 ntBASIC5.4□□□□□ -1.54
Hmgb1P63158 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC5.4□□□□□ -1.54
Hmgb1P63158 Gm28956-201ENSMUST00000189047 427 ntBASIC5.4□□□□□ -1.54
Hmgb1P63158 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC5.4□□□□□ -1.54
Hmgb1P63158 Gm19231-201ENSMUST00000193212 830 ntBASIC5.4□□□□□ -1.54
Hmgb1P63158 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Hmgb1P63158 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Hmgb1P63158 Gm6240-201ENSMUST00000208014 473 ntBASIC5.4□□□□□ -1.54
Hmgb1P63158 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC5.4□□□□□ -1.54
Hmgb1P63158 Gm45382-201ENSMUST00000210607 151 ntBASIC5.4□□□□□ -1.54
Hmgb1P63158 AC153968.2-201ENSMUST00000215579 1140 ntBASIC5.4□□□□□ -1.54
Hmgb1P63158 AC121966.1-201ENSMUST00000221458 282 ntBASIC5.4□□□□□ -1.54
Hmgb1P63158 Gm36501-201ENSMUST00000221857 745 ntBASIC5.4□□□□□ -1.54
Hmgb1P63158 AC109172.1-201ENSMUST00000227503 187 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms