Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm15377-201ENSMUST00000119594 246 ntBASIC5.44□□□□□ -1.54
Cux1P53564 Gm15190-201ENSMUST00000120855 276 ntBASIC5.44□□□□□ -1.54
Cux1P53564 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC5.44□□□□□ -1.54
Cux1P53564 Gm23775-201ENSMUST00000158991 249 ntBASIC5.44□□□□□ -1.54
Cux1P53564 Gm4207-201ENSMUST00000173144 960 ntBASIC5.44□□□□□ -1.54
Cux1P53564 Gm26991-201ENSMUST00000180950 620 ntBASIC5.44□□□□□ -1.54
Cux1P53564 Gm28069-201ENSMUST00000189926 214 ntBASIC5.44□□□□□ -1.54
Cux1P53564 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC5.44□□□□□ -1.54
Cux1P53564 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Cux1P53564 Gm19987-201ENSMUST00000216339 499 ntBASIC5.44□□□□□ -1.54
Cux1P53564 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC5.44□□□□□ -1.54
Cux1P53564 AC107757.3-201ENSMUST00000226312 535 ntBASIC5.44□□□□□ -1.54
Cux1P53564 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Cux1P53564 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Cux1P53564 Gm18913-201ENSMUST00000204311 1789 ntBASIC5.44□□□□□ -1.54
Cux1P53564 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Cux1P53564 Gm45809-201ENSMUST00000211661 3894 ntBASIC5.44□□□□□ -1.54
Cux1P53564 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Cux1P53564 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Cux1P53564 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Cux1P53564 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Cux1P53564 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Cux1P53564 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Cux1P53564 Gm6545-201ENSMUST00000217186 1786 ntBASIC5.44□□□□□ -1.54
Cux1P53564 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
Cux1P53564 Gm6893-201ENSMUST00000118385 522 ntBASIC5.43□□□□□ -1.54
Cux1P53564 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC5.43□□□□□ -1.54
Cux1P53564 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC5.43□□□□□ -1.54
Cux1P53564 Gm27783-201ENSMUST00000183534 105 ntBASIC5.43□□□□□ -1.54
Cux1P53564 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC5.43□□□□□ -1.54
Cux1P53564 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
Cux1P53564 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cux1P53564 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cux1P53564 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cux1P53564 Gm43010-201ENSMUST00000195993 2878 ntBASIC5.43□□□□□ -1.54
Cux1P53564 Gm11923-201ENSMUST00000118135 508 ntBASIC5.43□□□□□ -1.54
Cux1P53564 Gm16327-201ENSMUST00000137146 228 ntBASIC5.43□□□□□ -1.54
Cux1P53564 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Cux1P53564 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC5.43□□□□□ -1.54
Cux1P53564 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Cux1P53564 Mir7k-201ENSMUST00000184115 110 ntBASIC5.43□□□□□ -1.54
Cux1P53564 Gm28358-202ENSMUST00000189292 223 ntBASIC5.43□□□□□ -1.54
Cux1P53564 Gm44393-201ENSMUST00000197418 138 ntBASIC5.43□□□□□ -1.54
Cux1P53564 Gm42458-201ENSMUST00000201914 369 ntBASIC5.43□□□□□ -1.54
Cux1P53564 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC5.43□□□□□ -1.54
Cux1P53564 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC5.43□□□□□ -1.54
Cux1P53564 AC140368.1-202ENSMUST00000226131 658 ntBASIC5.43□□□□□ -1.54
Cux1P53564 AC108416.2-201ENSMUST00000226792 367 ntBASIC5.43□□□□□ -1.54
Cux1P53564 AC106830.1-201ENSMUST00000228032 1003 ntBASIC5.43□□□□□ -1.54
Cux1P53564 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Cux1P53564 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cux1P53564 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cux1P53564 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Cux1P53564 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Cux1P53564 Gm38101-201ENSMUST00000193484 3557 ntBASIC5.42□□□□□ -1.54
Cux1P53564 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cux1P53564 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Cux1P53564 AC167250.1-201ENSMUST00000213739 3813 ntBASIC5.42□□□□□ -1.54
Cux1P53564 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC5.42□□□□□ -1.54
Cux1P53564 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Cux1P53564 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Cux1P53564 AC160130.1-201ENSMUST00000220734 2735 ntBASIC5.42□□□□□ -1.54
Cux1P53564 n-R5s31-201ENSMUST00000104162 110 ntBASIC5.42□□□□□ -1.54
Cux1P53564 Gm7656-201ENSMUST00000182468 1004 ntBASIC5.42□□□□□ -1.54
Cux1P53564 Gm6445-201ENSMUST00000189515 1112 ntBASIC5.42□□□□□ -1.54
Cux1P53564 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Cux1P53564 AC126253.2-201ENSMUST00000226518 205 ntBASIC5.42□□□□□ -1.54
Cux1P53564 AC102815.1-201ENSMUST00000226662 1061 ntBASIC5.42□□□□□ -1.54
Cux1P53564 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC5.42□□□□□ -1.54
Cux1P53564 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Cux1P53564 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cux1P53564 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cux1P53564 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC5.41□□□□□ -1.54
Cux1P53564 Gm12578-201ENSMUST00000121244 417 ntBASIC5.41□□□□□ -1.54
Cux1P53564 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Cux1P53564 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Cux1P53564 Mir7682-201ENSMUST00000198467 58 ntBASIC5.41□□□□□ -1.54
Cux1P53564 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC5.41□□□□□ -1.54
Cux1P53564 AC153564.2-201ENSMUST00000219464 273 ntBASIC5.41□□□□□ -1.54
Cux1P53564 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Cux1P53564 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cux1P53564 Gm43845-201ENSMUST00000202462 1820 ntBASIC5.41□□□□□ -1.54
Cux1P53564 Gm43648-201ENSMUST00000197775 2485 ntBASIC5.41□□□□□ -1.54
Cux1P53564 AC154548.1-201ENSMUST00000225844 3838 ntBASIC5.4□□□□□ -1.54
Cux1P53564 Gm43665-201ENSMUST00000198672 1659 ntBASIC5.4□□□□□ -1.54
Cux1P53564 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Cux1P53564 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Cux1P53564 Gm23855-201ENSMUST00000158377 135 ntBASIC5.4□□□□□ -1.54
Cux1P53564 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC5.4□□□□□ -1.54
Cux1P53564 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Cux1P53564 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC5.4□□□□□ -1.54
Cux1P53564 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Cux1P53564 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Cux1P53564 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC5.4□□□□□ -1.54
Cux1P53564 Gm43613-201ENSMUST00000199409 1613 ntBASIC5.4□□□□□ -1.55
Cux1P53564 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Cux1P53564 Gm44164-201ENSMUST00000203605 2561 ntBASIC5.4□□□□□ -1.55
Cux1P53564 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Cux1P53564 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Cux1P53564 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms