Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm45427-201ENSMUST00000209572 1253 ntBASIC3.69□□□□□ -1.82
HttP42859 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.69□□□□□ -1.82
HttP42859 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
HttP42859 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HttP42859 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HttP42859 Gm10484-201ENSMUST00000196372 4759 ntBASIC3.68□□□□□ -1.82
HttP42859 Gm23060-201ENSMUST00000102345 109 ntBASIC3.68□□□□□ -1.82
HttP42859 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
HttP42859 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HttP42859 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.68□□□□□ -1.82
HttP42859 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
HttP42859 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC3.68□□□□□ -1.82
HttP42859 Gm43887-201ENSMUST00000204727 3186 ntBASIC3.68□□□□□ -1.82
HttP42859 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.68□□□□□ -1.82
HttP42859 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HttP42859 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
HttP42859 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HttP42859 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HttP42859 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
HttP42859 Mir215-201ENSMUST00000083628 112 ntBASIC3.68□□□□□ -1.82
HttP42859 Gm20276-201ENSMUST00000216122 2648 ntBASIC3.68□□□□□ -1.82
HttP42859 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC3.68□□□□□ -1.82
HttP42859 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HttP42859 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
HttP42859 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
HttP42859 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
HttP42859 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC3.68□□□□□ -1.82
HttP42859 Gm28594-201ENSMUST00000187022 661 ntBASIC3.68□□□□□ -1.82
HttP42859 AC140393.2-201ENSMUST00000226894 943 ntBASIC3.68□□□□□ -1.82
HttP42859 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
HttP42859 Gm38260-201ENSMUST00000193573 3995 ntBASIC3.67□□□□□ -1.82
HttP42859 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HttP42859 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
HttP42859 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
HttP42859 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.67□□□□□ -1.82
HttP42859 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC3.67□□□□□ -1.82
HttP42859 Gm37741-201ENSMUST00000191768 1256 ntBASIC3.67□□□□□ -1.82
HttP42859 Gm19694-201ENSMUST00000192364 505 ntBASIC3.67□□□□□ -1.82
HttP42859 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
HttP42859 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
HttP42859 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
HttP42859 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HttP42859 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC3.67□□□□□ -1.82
HttP42859 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HttP42859 Gm13504-201ENSMUST00000117490 316 ntBASIC3.67□□□□□ -1.82
HttP42859 Gm13650-201ENSMUST00000117729 433 ntBASIC3.67□□□□□ -1.82
HttP42859 Gm11456-201ENSMUST00000121070 256 ntBASIC3.67□□□□□ -1.82
HttP42859 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.67□□□□□ -1.82
HttP42859 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.67□□□□□ -1.82
HttP42859 AC154515.2-201ENSMUST00000226093 406 ntBASIC3.67□□□□□ -1.82
HttP42859 AC165106.3-201ENSMUST00000228191 3843 ntBASIC3.67□□□□□ -1.82
HttP42859 n-R5s40-201ENSMUST00000082475 124 ntBASIC3.67□□□□□ -1.82
HttP42859 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
HttP42859 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HttP42859 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.67□□□□□ -1.82
HttP42859 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
HttP42859 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC3.66□□□□□ -1.82
HttP42859 Gm12873-201ENSMUST00000119988 422 ntBASIC3.66□□□□□ -1.82
HttP42859 Gm11260-201ENSMUST00000121163 942 ntBASIC3.66□□□□□ -1.82
HttP42859 Gm11414-201ENSMUST00000121795 263 ntBASIC3.66□□□□□ -1.82
HttP42859 Gm2617-201ENSMUST00000185690 1066 ntBASIC3.66□□□□□ -1.82
HttP42859 Gm22970-201ENSMUST00000083304 186 ntBASIC3.66□□□□□ -1.82
HttP42859 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
HttP42859 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HttP42859 Gm650-201ENSMUST00000144428 1551 ntBASIC3.66□□□□□ -1.82
HttP42859 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
HttP42859 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.66□□□□□ -1.82
HttP42859 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HttP42859 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
HttP42859 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HttP42859 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HttP42859 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
HttP42859 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
HttP42859 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HttP42859 Gm11896-201ENSMUST00000121105 820 ntBASIC3.66□□□□□ -1.82
HttP42859 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.66□□□□□ -1.82
HttP42859 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3.66□□□□□ -1.82
HttP42859 Gm21842-201ENSMUST00000177552 498 ntBASIC3.66□□□□□ -1.82
HttP42859 Gm21626-201ENSMUST00000177791 498 ntBASIC3.66□□□□□ -1.82
HttP42859 Gm21562-201ENSMUST00000177888 498 ntBASIC3.66□□□□□ -1.82
HttP42859 Gm21539-201ENSMUST00000177925 498 ntBASIC3.66□□□□□ -1.82
HttP42859 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HttP42859 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HttP42859 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HttP42859 Gm17522-201ENSMUST00000178144 498 ntBASIC3.66□□□□□ -1.82
HttP42859 Gm21599-201ENSMUST00000178249 498 ntBASIC3.66□□□□□ -1.82
HttP42859 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HttP42859 Gm21914-201ENSMUST00000178452 498 ntBASIC3.66□□□□□ -1.82
HttP42859 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HttP42859 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HttP42859 Gm21723-201ENSMUST00000178692 498 ntBASIC3.66□□□□□ -1.82
HttP42859 Gm21916-201ENSMUST00000178771 498 ntBASIC3.66□□□□□ -1.82
HttP42859 Gm21801-201ENSMUST00000178865 498 ntBASIC3.66□□□□□ -1.82
HttP42859 Gm21633-201ENSMUST00000178941 498 ntBASIC3.66□□□□□ -1.82
HttP42859 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HttP42859 Gm17412-201ENSMUST00000179261 468 ntBASIC3.66□□□□□ -1.82
HttP42859 Gm21821-201ENSMUST00000179646 498 ntBASIC3.66□□□□□ -1.82
HttP42859 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HttP42859 Gm21588-201ENSMUST00000180074 498 ntBASIC3.66□□□□□ -1.82
HttP42859 Gm21780-201ENSMUST00000180128 498 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms