Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.85□□□□□ -1.63
Traf1P39428 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Traf1P39428 Gm15148-201ENSMUST00000117602 156 ntBASIC4.85□□□□□ -1.63
Traf1P39428 Gm12340-201ENSMUST00000121617 462 ntBASIC4.85□□□□□ -1.63
Traf1P39428 Gm14122-201ENSMUST00000122076 973 ntBASIC4.85□□□□□ -1.63
Traf1P39428 Gm15212-201ENSMUST00000122403 466 ntBASIC4.85□□□□□ -1.63
Traf1P39428 Gm23957-201ENSMUST00000157209 90 ntBASIC4.85□□□□□ -1.63
Traf1P39428 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC4.85□□□□□ -1.63
Traf1P39428 Gm22392-201ENSMUST00000177971 107 ntBASIC4.85□□□□□ -1.63
Traf1P39428 Gm21809-201ENSMUST00000178495 468 ntBASIC4.85□□□□□ -1.63
Traf1P39428 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Traf1P39428 Gm17412-201ENSMUST00000179261 468 ntBASIC4.85□□□□□ -1.63
Traf1P39428 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Traf1P39428 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC4.85□□□□□ -1.63
Traf1P39428 Gm5974-201ENSMUST00000181607 986 ntBASIC4.85□□□□□ -1.63
Traf1P39428 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC4.85□□□□□ -1.63
Traf1P39428 Mir6996-201ENSMUST00000183922 61 ntBASIC4.85□□□□□ -1.63
Traf1P39428 Gm27190-201ENSMUST00000184890 542 ntBASIC4.85□□□□□ -1.63
Traf1P39428 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC4.85□□□□□ -1.63
Traf1P39428 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Traf1P39428 Gm19030-201ENSMUST00000194947 552 ntBASIC4.85□□□□□ -1.63
Traf1P39428 Gm43586-201ENSMUST00000195948 310 ntBASIC4.85□□□□□ -1.63
Traf1P39428 Gm43028-201ENSMUST00000202561 481 ntBASIC4.85□□□□□ -1.63
Traf1P39428 Gm44059-201ENSMUST00000204048 351 ntBASIC4.85□□□□□ -1.63
Traf1P39428 Gm3189-201ENSMUST00000205595 832 ntBASIC4.85□□□□□ -1.63
Traf1P39428 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC4.85□□□□□ -1.63
Traf1P39428 Gm44543-201ENSMUST00000209136 396 ntBASIC4.85□□□□□ -1.63
Traf1P39428 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC4.85□□□□□ -1.63
Traf1P39428 Gm29884-201ENSMUST00000218403 453 ntBASIC4.85□□□□□ -1.63
Traf1P39428 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC4.85□□□□□ -1.63
Traf1P39428 Gm6841-201ENSMUST00000220602 598 ntBASIC4.85□□□□□ -1.63
Traf1P39428 CT009733.1-201ENSMUST00000225322 425 ntBASIC4.85□□□□□ -1.63
Traf1P39428 AC140393.2-201ENSMUST00000226894 943 ntBASIC4.85□□□□□ -1.63
Traf1P39428 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Traf1P39428 Gm5548-201ENSMUST00000055878 397 ntBASIC4.85□□□□□ -1.63
Traf1P39428 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC4.85□□□□□ -1.63
Traf1P39428 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Traf1P39428 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC4.85□□□□□ -1.63
Traf1P39428 n-R5s86-201ENSMUST00000083215 119 ntBASIC4.85□□□□□ -1.63
Traf1P39428 Gm18300-201ENSMUST00000192792 1406 ntBASIC4.85□□□□□ -1.63
Traf1P39428 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
Traf1P39428 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Traf1P39428 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
Traf1P39428 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Traf1P39428 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Traf1P39428 Gm38069-201ENSMUST00000195360 2144 ntBASIC4.85□□□□□ -1.63
Traf1P39428 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC4.85□□□□□ -1.63
Traf1P39428 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
Traf1P39428 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Traf1P39428 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Traf1P39428 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Traf1P39428 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC4.84□□□□□ -1.63
Traf1P39428 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Traf1P39428 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Traf1P39428 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Traf1P39428 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Traf1P39428 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC4.84□□□□□ -1.63
Traf1P39428 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Traf1P39428 Gm15382-201ENSMUST00000118011 537 ntBASIC4.84□□□□□ -1.63
Traf1P39428 Gm15951-201ENSMUST00000118377 400 ntBASIC4.84□□□□□ -1.63
Traf1P39428 Gm24503-201ENSMUST00000158454 135 ntBASIC4.84□□□□□ -1.63
Traf1P39428 Gm27427-201ENSMUST00000185134 193 ntBASIC4.84□□□□□ -1.63
Traf1P39428 Gm43440-201ENSMUST00000201957 729 ntBASIC4.84□□□□□ -1.63
Traf1P39428 Gm45006-201ENSMUST00000206078 690 ntBASIC4.84□□□□□ -1.63
Traf1P39428 Gm44765-201ENSMUST00000206927 601 ntBASIC4.84□□□□□ -1.63
Traf1P39428 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.84□□□□□ -1.63
Traf1P39428 Gm18016-201ENSMUST00000216119 801 ntBASIC4.84□□□□□ -1.63
Traf1P39428 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Traf1P39428 Gm46998-201ENSMUST00000221444 330 ntBASIC4.84□□□□□ -1.63
Traf1P39428 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC4.84□□□□□ -1.63
Traf1P39428 AC117949.2-201ENSMUST00000225900 584 ntBASIC4.84□□□□□ -1.63
Traf1P39428 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Traf1P39428 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Traf1P39428 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Traf1P39428 Gm10042-201ENSMUST00000079884 78 ntBASIC4.84□□□□□ -1.63
Traf1P39428 Gm6462-201ENSMUST00000081488 304 ntBASIC4.84□□□□□ -1.63
Traf1P39428 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Traf1P39428 Gm7381-201ENSMUST00000098958 300 ntBASIC4.84□□□□□ -1.63
Traf1P39428 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
Traf1P39428 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Traf1P39428 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Traf1P39428 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.64
Traf1P39428 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.84□□□□□ -1.64
Traf1P39428 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Traf1P39428 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Traf1P39428 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Traf1P39428 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC4.83□□□□□ -1.64
Traf1P39428 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Traf1P39428 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Traf1P39428 AC164102.1-201ENSMUST00000220524 1553 ntBASIC4.83□□□□□ -1.64
Traf1P39428 Gm7646-201ENSMUST00000198590 1346 ntBASIC4.83□□□□□ -1.64
Traf1P39428 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC4.83□□□□□ -1.64
Traf1P39428 Gm14890-201ENSMUST00000117660 676 ntBASIC4.83□□□□□ -1.64
Traf1P39428 Gm11843-201ENSMUST00000118984 425 ntBASIC4.83□□□□□ -1.64
Traf1P39428 Gm22345-201ENSMUST00000122644 107 ntBASIC4.83□□□□□ -1.64
Traf1P39428 Gm7855-201ENSMUST00000137737 687 ntBASIC4.83□□□□□ -1.64
Traf1P39428 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC4.83□□□□□ -1.64
Traf1P39428 Gm24961-201ENSMUST00000157918 184 ntBASIC4.83□□□□□ -1.64
Traf1P39428 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC4.83□□□□□ -1.64
Traf1P39428 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.83□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms