Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm7195-201ENSMUST00000190869 1707 ntBASIC5.89□□□□□ -1.47
RaraP11416 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
RaraP11416 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RaraP11416 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RaraP11416 Mir466f-4-201ENSMUST00000116930 121 ntBASIC5.89□□□□□ -1.47
RaraP11416 Gm13772-201ENSMUST00000118431 317 ntBASIC5.89□□□□□ -1.47
RaraP11416 Gm3943-201ENSMUST00000118606 718 ntBASIC5.89□□□□□ -1.47
RaraP11416 Gm14517-201ENSMUST00000119040 337 ntBASIC5.89□□□□□ -1.47
RaraP11416 Gm6797-201ENSMUST00000119440 512 ntBASIC5.89□□□□□ -1.47
RaraP11416 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC5.89□□□□□ -1.47
RaraP11416 Gm23214-201ENSMUST00000122716 157 ntBASIC5.89□□□□□ -1.47
RaraP11416 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC5.89□□□□□ -1.47
RaraP11416 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC5.89□□□□□ -1.47
RaraP11416 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC5.89□□□□□ -1.47
RaraP11416 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC5.89□□□□□ -1.47
RaraP11416 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RaraP11416 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC5.89□□□□□ -1.47
RaraP11416 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
RaraP11416 Gm22307-201ENSMUST00000180019 107 ntBASIC5.89□□□□□ -1.47
RaraP11416 Gm28257-201ENSMUST00000185244 463 ntBASIC5.89□□□□□ -1.47
RaraP11416 Gm4854-201ENSMUST00000185902 574 ntBASIC5.89□□□□□ -1.47
RaraP11416 Gm29045-201ENSMUST00000187278 698 ntBASIC5.89□□□□□ -1.47
RaraP11416 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC5.89□□□□□ -1.47
RaraP11416 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
RaraP11416 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.89□□□□□ -1.47
RaraP11416 Gm6850-201ENSMUST00000210031 530 ntBASIC5.89□□□□□ -1.47
RaraP11416 AC154521.1-201ENSMUST00000222635 330 ntBASIC5.89□□□□□ -1.47
RaraP11416 AC156559.2-201ENSMUST00000224403 384 ntBASIC5.89□□□□□ -1.47
RaraP11416 AC120375.2-202ENSMUST00000228722 397 ntBASIC5.89□□□□□ -1.47
RaraP11416 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
RaraP11416 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RaraP11416 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RaraP11416 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC5.89□□□□□ -1.47
RaraP11416 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
RaraP11416 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RaraP11416 Olfr895-201ENSMUST00000093864 951 ntBASIC5.89□□□□□ -1.47
RaraP11416 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RaraP11416 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.89□□□□□ -1.47
RaraP11416 Gm37789-201ENSMUST00000192862 2889 ntBASIC5.89□□□□□ -1.47
RaraP11416 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RaraP11416 Gm37485-201ENSMUST00000192326 2953 ntBASIC5.89□□□□□ -1.47
RaraP11416 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
RaraP11416 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC5.89□□□□□ -1.47
RaraP11416 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC5.89□□□□□ -1.47
RaraP11416 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
RaraP11416 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RaraP11416 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RaraP11416 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC5.89□□□□□ -1.47
RaraP11416 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RaraP11416 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
RaraP11416 Gm44164-201ENSMUST00000203605 2561 ntBASIC5.88□□□□□ -1.47
RaraP11416 Gm14886-201ENSMUST00000117208 2629 ntBASIC5.88□□□□□ -1.47
RaraP11416 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RaraP11416 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RaraP11416 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.88□□□□□ -1.47
RaraP11416 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
RaraP11416 Gm15025-201ENSMUST00000118434 418 ntBASIC5.88□□□□□ -1.47
RaraP11416 Gm7189-201ENSMUST00000119811 429 ntBASIC5.88□□□□□ -1.47
RaraP11416 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC5.88□□□□□ -1.47
RaraP11416 Gm11805-201ENSMUST00000121238 600 ntBASIC5.88□□□□□ -1.47
RaraP11416 Gm25325-201ENSMUST00000122559 86 ntBASIC5.88□□□□□ -1.47
RaraP11416 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC5.88□□□□□ -1.47
RaraP11416 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC5.88□□□□□ -1.47
RaraP11416 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC5.88□□□□□ -1.47
RaraP11416 Gm26086-201ENSMUST00000157902 263 ntBASIC5.88□□□□□ -1.47
RaraP11416 Gm22724-201ENSMUST00000158091 127 ntBASIC5.88□□□□□ -1.47
RaraP11416 Gm22085-201ENSMUST00000158344 110 ntBASIC5.88□□□□□ -1.47
RaraP11416 Gm10177-201ENSMUST00000160052 444 ntBASIC5.88□□□□□ -1.47
RaraP11416 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
RaraP11416 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC5.88□□□□□ -1.47
RaraP11416 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RaraP11416 Gm27754-201ENSMUST00000183340 126 ntBASIC5.88□□□□□ -1.47
RaraP11416 Gm29376-201ENSMUST00000189357 835 ntBASIC5.88□□□□□ -1.47
RaraP11416 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC5.88□□□□□ -1.47
RaraP11416 Gm28996-201ENSMUST00000190316 721 ntBASIC5.88□□□□□ -1.47
RaraP11416 Gm28640-201ENSMUST00000190918 550 ntBASIC5.88□□□□□ -1.47
RaraP11416 Gm37495-201ENSMUST00000194590 264 ntBASIC5.88□□□□□ -1.47
RaraP11416 Gm43078-201ENSMUST00000197222 168 ntBASIC5.88□□□□□ -1.47
RaraP11416 Gm42828-201ENSMUST00000199669 469 ntBASIC5.88□□□□□ -1.47
RaraP11416 Gm44539-201ENSMUST00000206010 238 ntBASIC5.88□□□□□ -1.47
RaraP11416 Gm46223-201ENSMUST00000215196 675 ntBASIC5.88□□□□□ -1.47
RaraP11416 CT030170.4-202ENSMUST00000221109 540 ntBASIC5.88□□□□□ -1.47
RaraP11416 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC5.88□□□□□ -1.47
RaraP11416 AC125399.1-201ENSMUST00000224236 595 ntBASIC5.88□□□□□ -1.47
RaraP11416 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
RaraP11416 Snord42a-201ENSMUST00000082606 65 ntBASIC5.88□□□□□ -1.47
RaraP11416 Gm22508-201ENSMUST00000082772 110 ntBASIC5.88□□□□□ -1.47
RaraP11416 Gm25853-201ENSMUST00000082793 132 ntBASIC5.88□□□□□ -1.47
RaraP11416 Gm6177-201ENSMUST00000085589 465 ntBASIC5.88□□□□□ -1.47
RaraP11416 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
RaraP11416 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC5.88□□□□□ -1.47
RaraP11416 Gm2223-201ENSMUST00000112099 1350 ntBASIC5.88□□□□□ -1.47
RaraP11416 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RaraP11416 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RaraP11416 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.88□□□□□ -1.47
RaraP11416 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RaraP11416 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
RaraP11416 Cyp2c70-201ENSMUST00000051846 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RaraP11416 Gm44424-201ENSMUST00000203438 1826 ntBASIC5.88□□□□□ -1.47
RaraP11416 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms