Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Lire1P11260 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Lire1P11260 Gm45697-201ENSMUST00000212893 2876 ntBASIC4.34□□□□□ -1.71
Lire1P11260 Gm16082-201ENSMUST00000115992 377 ntBASIC4.34□□□□□ -1.71
Lire1P11260 Gm14995-201ENSMUST00000117135 391 ntBASIC4.34□□□□□ -1.71
Lire1P11260 Gm15126-201ENSMUST00000118631 833 ntBASIC4.34□□□□□ -1.71
Lire1P11260 Gm12311-201ENSMUST00000118803 374 ntBASIC4.34□□□□□ -1.71
Lire1P11260 Gm13170-201ENSMUST00000119716 643 ntBASIC4.34□□□□□ -1.71
Lire1P11260 Gm16458-201ENSMUST00000121428 502 ntBASIC4.34□□□□□ -1.71
Lire1P11260 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
Lire1P11260 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC4.34□□□□□ -1.71
Lire1P11260 Gm20701-201ENSMUST00000176082 347 ntBASIC4.34□□□□□ -1.71
Lire1P11260 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC4.34□□□□□ -1.71
Lire1P11260 Mir6391-201ENSMUST00000184391 104 ntBASIC4.34□□□□□ -1.71
Lire1P11260 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC4.34□□□□□ -1.71
Lire1P11260 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC4.34□□□□□ -1.71
Lire1P11260 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC4.34□□□□□ -1.71
Lire1P11260 Gm20162-201ENSMUST00000193629 871 ntBASIC4.34□□□□□ -1.71
Lire1P11260 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.34□□□□□ -1.71
Lire1P11260 Gm43476-201ENSMUST00000197873 405 ntBASIC4.34□□□□□ -1.71
Lire1P11260 Gm2314-201ENSMUST00000200391 586 ntBASIC4.34□□□□□ -1.71
Lire1P11260 Gm6051-201ENSMUST00000201529 352 ntBASIC4.34□□□□□ -1.71
Lire1P11260 Gm43028-201ENSMUST00000202561 481 ntBASIC4.34□□□□□ -1.71
Lire1P11260 Gm43968-201ENSMUST00000203388 389 ntBASIC4.34□□□□□ -1.71
Lire1P11260 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC4.34□□□□□ -1.71
Lire1P11260 AC152946.2-201ENSMUST00000219071 337 ntBASIC4.34□□□□□ -1.71
Lire1P11260 Gm18704-201ENSMUST00000219736 446 ntBASIC4.34□□□□□ -1.71
Lire1P11260 CT009600.2-201ENSMUST00000226638 481 ntBASIC4.34□□□□□ -1.71
Lire1P11260 AC192088.2-201ENSMUST00000227590 411 ntBASIC4.34□□□□□ -1.71
Lire1P11260 AC161269.1-201ENSMUST00000228426 318 ntBASIC4.34□□□□□ -1.71
Lire1P11260 AC154838.1-201ENSMUST00000228944 911 ntBASIC4.34□□□□□ -1.71
Lire1P11260 Gm5215-201ENSMUST00000054380 405 ntBASIC4.34□□□□□ -1.71
Lire1P11260 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Lire1P11260 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Lire1P11260 Gm22005-201ENSMUST00000082795 141 ntBASIC4.34□□□□□ -1.71
Lire1P11260 Gm10242-201ENSMUST00000090064 330 ntBASIC4.34□□□□□ -1.71
Lire1P11260 Gm25821-201ENSMUST00000093657 133 ntBASIC4.34□□□□□ -1.71
Lire1P11260 AC124746.1-201ENSMUST00000227535 1300 ntBASIC4.34□□□□□ -1.71
Lire1P11260 Gm37965-201ENSMUST00000195304 1362 ntBASIC4.34□□□□□ -1.71
Lire1P11260 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Lire1P11260 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Lire1P11260 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Lire1P11260 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
Lire1P11260 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
Lire1P11260 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
Lire1P11260 Gm37626-201ENSMUST00000194332 4563 ntBASIC4.33□□□□□ -1.72
Lire1P11260 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.33□□□□□ -1.72
Lire1P11260 Gm38073-201ENSMUST00000195141 3665 ntBASIC4.33□□□□□ -1.72
Lire1P11260 Gm11284-201ENSMUST00000121910 1887 ntBASIC4.33□□□□□ -1.72
Lire1P11260 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC4.33□□□□□ -1.72
Lire1P11260 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
Lire1P11260 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Lire1P11260 Gm26387-201ENSMUST00000104238 132 ntBASIC4.33□□□□□ -1.72
Lire1P11260 n-R5s52-201ENSMUST00000104614 113 ntBASIC4.33□□□□□ -1.72
Lire1P11260 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Lire1P11260 Gm12884-201ENSMUST00000120371 325 ntBASIC4.33□□□□□ -1.72
Lire1P11260 Gm14840-201ENSMUST00000122135 594 ntBASIC4.33□□□□□ -1.72
Lire1P11260 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC4.33□□□□□ -1.72
Lire1P11260 Gm17043-201ENSMUST00000164621 1283 ntBASIC4.33□□□□□ -1.72
Lire1P11260 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC4.33□□□□□ -1.72
Lire1P11260 Gm14527-201ENSMUST00000179300 639 ntBASIC4.33□□□□□ -1.72
Lire1P11260 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Lire1P11260 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC4.33□□□□□ -1.72
Lire1P11260 Gm27834-201ENSMUST00000183427 125 ntBASIC4.33□□□□□ -1.72
Lire1P11260 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC4.33□□□□□ -1.72
Lire1P11260 Gm19080-201ENSMUST00000196082 550 ntBASIC4.33□□□□□ -1.72
Lire1P11260 Trdv3-201ENSMUST00000198551 309 ntBASIC4.33□□□□□ -1.72
Lire1P11260 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC4.33□□□□□ -1.72
Lire1P11260 Gm42474-201ENSMUST00000201073 505 ntBASIC4.33□□□□□ -1.72
Lire1P11260 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Lire1P11260 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC4.33□□□□□ -1.72
Lire1P11260 Gm34005-201ENSMUST00000215834 282 ntBASIC4.33□□□□□ -1.72
Lire1P11260 Gm46327-201ENSMUST00000218240 365 ntBASIC4.33□□□□□ -1.72
Lire1P11260 Gm46234-201ENSMUST00000218702 259 ntBASIC4.33□□□□□ -1.72
Lire1P11260 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC4.33□□□□□ -1.72
Lire1P11260 AC153361.1-201ENSMUST00000219679 247 ntBASIC4.33□□□□□ -1.72
Lire1P11260 AC124549.2-201ENSMUST00000224243 222 ntBASIC4.33□□□□□ -1.72
Lire1P11260 AC124400.1-201ENSMUST00000225779 193 ntBASIC4.33□□□□□ -1.72
Lire1P11260 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Lire1P11260 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Lire1P11260 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Lire1P11260 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Lire1P11260 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Lire1P11260 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Lire1P11260 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Lire1P11260 Mir28a-201ENSMUST00000083560 86 ntBASIC4.33□□□□□ -1.72
Lire1P11260 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Lire1P11260 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Lire1P11260 Gm42967-201ENSMUST00000198647 2312 ntBASIC4.33□□□□□ -1.72
Lire1P11260 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Lire1P11260 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.32□□□□□ -1.72
Lire1P11260 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Lire1P11260 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Lire1P11260 AC142245.1-201ENSMUST00000226611 1505 ntBASIC4.32□□□□□ -1.72
Lire1P11260 Gm43259-201ENSMUST00000198446 3277 ntBASIC4.32□□□□□ -1.72
Lire1P11260 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Lire1P11260 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Lire1P11260 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Lire1P11260 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Lire1P11260 Snord66-201ENSMUST00000104051 75 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms