Protein–RNA interactions for Protein: P10628

Hoxd4, Homeobox protein Hox-D4, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd4P10628 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC4.74□□□□□ -1.65
Hoxd4P10628 Gm15974-201ENSMUST00000159103 531 ntBASIC4.74□□□□□ -1.65
Hoxd4P10628 Gm16101-201ENSMUST00000160695 430 ntBASIC4.74□□□□□ -1.65
Hoxd4P10628 Gm22932-201ENSMUST00000175510 72 ntBASIC4.74□□□□□ -1.65
Hoxd4P10628 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC4.74□□□□□ -1.65
Hoxd4P10628 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC4.74□□□□□ -1.65
Hoxd4P10628 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Hoxd4P10628 Gm21978-201ENSMUST00000179696 377 ntBASIC4.74□□□□□ -1.65
Hoxd4P10628 Mir6992-201ENSMUST00000183342 109 ntBASIC4.74□□□□□ -1.65
Hoxd4P10628 Mir6541-201ENSMUST00000183649 110 ntBASIC4.74□□□□□ -1.65
Hoxd4P10628 Gm27849-201ENSMUST00000183673 125 ntBASIC4.74□□□□□ -1.65
Hoxd4P10628 Mir6952-201ENSMUST00000185092 61 ntBASIC4.74□□□□□ -1.65
Hoxd4P10628 Gm29376-201ENSMUST00000189357 835 ntBASIC4.74□□□□□ -1.65
Hoxd4P10628 Gm37682-201ENSMUST00000191776 522 ntBASIC4.74□□□□□ -1.65
Hoxd4P10628 Gm38011-201ENSMUST00000193312 279 ntBASIC4.74□□□□□ -1.65
Hoxd4P10628 Gm43494-201ENSMUST00000197672 388 ntBASIC4.74□□□□□ -1.65
Hoxd4P10628 Gm43444-201ENSMUST00000198123 291 ntBASIC4.74□□□□□ -1.65
Hoxd4P10628 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC4.74□□□□□ -1.65
Hoxd4P10628 Mir466e-201ENSMUST00000198862 84 ntBASIC4.74□□□□□ -1.65
Hoxd4P10628 Mir466c-1-201ENSMUST00000200654 84 ntBASIC4.74□□□□□ -1.65
Hoxd4P10628 Gm43440-201ENSMUST00000201957 729 ntBASIC4.74□□□□□ -1.65
Hoxd4P10628 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC4.74□□□□□ -1.65
Hoxd4P10628 Gm7802-201ENSMUST00000216464 262 ntBASIC4.74□□□□□ -1.65
Hoxd4P10628 Gm20304-201ENSMUST00000218168 444 ntBASIC4.74□□□□□ -1.65
Hoxd4P10628 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC4.74□□□□□ -1.65
Hoxd4P10628 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC4.74□□□□□ -1.65
Hoxd4P10628 AC154616.2-201ENSMUST00000227978 398 ntBASIC4.74□□□□□ -1.65
Hoxd4P10628 Gm26056-201ENSMUST00000083043 104 ntBASIC4.74□□□□□ -1.65
Hoxd4P10628 Gm24764-201ENSMUST00000083686 199 ntBASIC4.74□□□□□ -1.65
Hoxd4P10628 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Hoxd4P10628 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Hoxd4P10628 Gm45853-201ENSMUST00000212310 3171 ntBASIC4.74□□□□□ -1.65
Hoxd4P10628 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
Hoxd4P10628 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Hoxd4P10628 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC4.74□□□□□ -1.65
Hoxd4P10628 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC4.74□□□□□ -1.65
Hoxd4P10628 Gm43333-201ENSMUST00000198340 2262 ntBASIC4.74□□□□□ -1.65
Hoxd4P10628 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Hoxd4P10628 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Hoxd4P10628 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Hoxd4P10628 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.73□□□□□ -1.65
Hoxd4P10628 AC142245.1-201ENSMUST00000226611 1505 ntBASIC4.73□□□□□ -1.65
Hoxd4P10628 Gm42559-201ENSMUST00000201811 3532 ntBASIC4.73□□□□□ -1.65
Hoxd4P10628 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC4.73□□□□□ -1.65
Hoxd4P10628 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Hoxd4P10628 Gm23746-201ENSMUST00000104229 125 ntBASIC4.73□□□□□ -1.65
Hoxd4P10628 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Hoxd4P10628 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
Hoxd4P10628 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Hoxd4P10628 Gm14575-201ENSMUST00000117210 560 ntBASIC4.73□□□□□ -1.65
Hoxd4P10628 Gm14901-201ENSMUST00000119001 283 ntBASIC4.73□□□□□ -1.65
Hoxd4P10628 Gm16423-201ENSMUST00000120078 947 ntBASIC4.73□□□□□ -1.65
Hoxd4P10628 Gm15331-201ENSMUST00000120225 385 ntBASIC4.73□□□□□ -1.65
Hoxd4P10628 Gm8761-201ENSMUST00000121507 955 ntBASIC4.73□□□□□ -1.65
Hoxd4P10628 Gm25459-201ENSMUST00000157953 114 ntBASIC4.73□□□□□ -1.65
Hoxd4P10628 Gm22261-201ENSMUST00000158691 324 ntBASIC4.73□□□□□ -1.65
Hoxd4P10628 Gm16038-201ENSMUST00000159317 193 ntBASIC4.73□□□□□ -1.65
Hoxd4P10628 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Hoxd4P10628 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Hoxd4P10628 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC4.73□□□□□ -1.65
Hoxd4P10628 Trbv10-201ENSMUST00000168322 289 ntBASIC4.73□□□□□ -1.65
Hoxd4P10628 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC4.73□□□□□ -1.65
Hoxd4P10628 Gm24561-201ENSMUST00000175182 95 ntBASIC4.73□□□□□ -1.65
Hoxd4P10628 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Hoxd4P10628 Gm26177-201ENSMUST00000178683 107 ntBASIC4.73□□□□□ -1.65
Hoxd4P10628 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Hoxd4P10628 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC4.73□□□□□ -1.65
Hoxd4P10628 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Hoxd4P10628 Gm27024-201ENSMUST00000182561 755 ntBASIC4.73□□□□□ -1.65
Hoxd4P10628 Gm27699-201ENSMUST00000183553 180 ntBASIC4.73□□□□□ -1.65
Hoxd4P10628 Gm43114-201ENSMUST00000198298 343 ntBASIC4.73□□□□□ -1.65
Hoxd4P10628 Mir3970-201ENSMUST00000199287 90 ntBASIC4.73□□□□□ -1.65
Hoxd4P10628 Gm44923-201ENSMUST00000206673 85 ntBASIC4.73□□□□□ -1.65
Hoxd4P10628 Gm17999-201ENSMUST00000211568 542 ntBASIC4.73□□□□□ -1.65
Hoxd4P10628 Gm45727-201ENSMUST00000212886 572 ntBASIC4.73□□□□□ -1.65
Hoxd4P10628 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC4.73□□□□□ -1.65
Hoxd4P10628 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC4.73□□□□□ -1.65
Hoxd4P10628 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Hoxd4P10628 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Hoxd4P10628 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC4.73□□□□□ -1.65
Hoxd4P10628 Gm23737-201ENSMUST00000082547 159 ntBASIC4.73□□□□□ -1.65
Hoxd4P10628 Gm25859-201ENSMUST00000083710 91 ntBASIC4.73□□□□□ -1.65
Hoxd4P10628 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Hoxd4P10628 Defa-ps18-201ENSMUST00000098889 371 ntBASIC4.73□□□□□ -1.65
Hoxd4P10628 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Hoxd4P10628 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Hoxd4P10628 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Hoxd4P10628 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
Hoxd4P10628 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.73□□□□□ -1.65
Hoxd4P10628 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.73□□□□□ -1.65
Hoxd4P10628 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
Hoxd4P10628 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Hoxd4P10628 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Hoxd4P10628 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Hoxd4P10628 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Hoxd4P10628 Gm43924-201ENSMUST00000204851 1736 ntBASIC4.72□□□□□ -1.65
Hoxd4P10628 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Hoxd4P10628 Smc5-206ENSMUST00000226111 3265 ntBASIC4.72□□□□□ -1.65
Hoxd4P10628 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Hoxd4P10628 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms