Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 AC131117.1-201ENSMUST00000225154 1171 ntBASIC3.01□□□□□ -1.93
Hmgb3O54879 AC138718.1-201ENSMUST00000225947 1009 ntBASIC3.01□□□□□ -1.93
Hmgb3O54879 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Hmgb3O54879 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Hmgb3O54879 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Hmgb3O54879 Gm23518-201ENSMUST00000082835 153 ntBASIC3.01□□□□□ -1.93
Hmgb3O54879 AC101945.4-201ENSMUST00000228464 1976 ntBASIC3.01□□□□□ -1.93
Hmgb3O54879 Gm44224-201ENSMUST00000204131 1463 ntBASIC3.01□□□□□ -1.93
Hmgb3O54879 Gm43260-201ENSMUST00000197378 2430 ntBASIC3.01□□□□□ -1.93
Hmgb3O54879 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Hmgb3O54879 Gm15095-201ENSMUST00000118996 1430 ntBASIC3.01□□□□□ -1.93
Hmgb3O54879 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.01□□□□□ -1.93
Hmgb3O54879 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC3□□□□□ -1.93
Hmgb3O54879 Gm44624-201ENSMUST00000208700 2278 ntBASIC3□□□□□ -1.93
Hmgb3O54879 Gm37777-201ENSMUST00000195546 3366 ntBASIC3□□□□□ -1.93
Hmgb3O54879 Gm5653-201ENSMUST00000223393 1337 ntBASIC3□□□□□ -1.93
Hmgb3O54879 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Hmgb3O54879 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC3□□□□□ -1.93
Hmgb3O54879 Gm37802-201ENSMUST00000194998 2643 ntBASIC3□□□□□ -1.93
Hmgb3O54879 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC3□□□□□ -1.93
Hmgb3O54879 Gm44288-201ENSMUST00000205061 2795 ntBASIC3□□□□□ -1.93
Hmgb3O54879 Snora64-201ENSMUST00000104521 134 ntBASIC3□□□□□ -1.93
Hmgb3O54879 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC3□□□□□ -1.93
Hmgb3O54879 Gm13489-201ENSMUST00000121234 971 ntBASIC3□□□□□ -1.93
Hmgb3O54879 Gm11645-201ENSMUST00000121589 649 ntBASIC3□□□□□ -1.93
Hmgb3O54879 Gm13508-201ENSMUST00000121639 775 ntBASIC3□□□□□ -1.93
Hmgb3O54879 Gm13366-201ENSMUST00000122198 970 ntBASIC3□□□□□ -1.93
Hmgb3O54879 Gm25177-201ENSMUST00000122634 117 ntBASIC3□□□□□ -1.93
Hmgb3O54879 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC3□□□□□ -1.93
Hmgb3O54879 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC3□□□□□ -1.93
Hmgb3O54879 Gm15733-201ENSMUST00000132957 242 ntBASIC3□□□□□ -1.93
Hmgb3O54879 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC3□□□□□ -1.93
Hmgb3O54879 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC3□□□□□ -1.93
Hmgb3O54879 Gm24059-201ENSMUST00000157493 312 ntBASIC3□□□□□ -1.93
Hmgb3O54879 Gm23501-201ENSMUST00000157744 256 ntBASIC3□□□□□ -1.93
Hmgb3O54879 Gm26085-201ENSMUST00000157900 116 ntBASIC3□□□□□ -1.93
Hmgb3O54879 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
Hmgb3O54879 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC3□□□□□ -1.93
Hmgb3O54879 Gm15143-201ENSMUST00000178180 714 ntBASIC3□□□□□ -1.93
Hmgb3O54879 Mir6903-201ENSMUST00000183597 88 ntBASIC3□□□□□ -1.93
Hmgb3O54879 Mir7653-201ENSMUST00000184358 61 ntBASIC3□□□□□ -1.93
Hmgb3O54879 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC3□□□□□ -1.93
Hmgb3O54879 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3□□□□□ -1.93
Hmgb3O54879 Gm18183-201ENSMUST00000191024 615 ntBASIC3□□□□□ -1.93
Hmgb3O54879 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC3□□□□□ -1.93
Hmgb3O54879 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC3□□□□□ -1.93
Hmgb3O54879 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
Hmgb3O54879 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC3□□□□□ -1.93
Hmgb3O54879 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3□□□□□ -1.93
Hmgb3O54879 Gm45727-201ENSMUST00000212886 572 ntBASIC3□□□□□ -1.93
Hmgb3O54879 Gm16419-201ENSMUST00000221057 625 ntBASIC3□□□□□ -1.93
Hmgb3O54879 AC154510.1-201ENSMUST00000223925 737 ntBASIC3□□□□□ -1.93
Hmgb3O54879 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC3□□□□□ -1.93
Hmgb3O54879 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Hmgb3O54879 Mir26a-2-201ENSMUST00000083496 84 ntBASIC3□□□□□ -1.93
Hmgb3O54879 Olfr713-201ENSMUST00000098139 975 ntBASIC3□□□□□ -1.93
Hmgb3O54879 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
Hmgb3O54879 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Hmgb3O54879 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC3□□□□□ -1.93
Hmgb3O54879 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC3□□□□□ -1.93
Hmgb3O54879 Gm12010-201ENSMUST00000122400 2017 ntBASIC3□□□□□ -1.93
Hmgb3O54879 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Hmgb3O54879 Gm3956-201ENSMUST00000164882 2560 ntBASIC3□□□□□ -1.93
Hmgb3O54879 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Hmgb3O54879 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC3□□□□□ -1.93
Hmgb3O54879 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Hmgb3O54879 Gm45809-201ENSMUST00000211661 3894 ntBASIC2.99□□□□□ -1.93
Hmgb3O54879 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC2.99□□□□□ -1.93
Hmgb3O54879 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Hmgb3O54879 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Hmgb3O54879 Gm15151-201ENSMUST00000117106 177 ntBASIC2.99□□□□□ -1.93
Hmgb3O54879 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC2.99□□□□□ -1.93
Hmgb3O54879 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC2.99□□□□□ -1.93
Hmgb3O54879 Klra14-ps-201ENSMUST00000119532 802 ntBASIC2.99□□□□□ -1.93
Hmgb3O54879 Gm11403-201ENSMUST00000122195 369 ntBASIC2.99□□□□□ -1.93
Hmgb3O54879 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Hmgb3O54879 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC2.99□□□□□ -1.93
Hmgb3O54879 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC2.99□□□□□ -1.93
Hmgb3O54879 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC2.99□□□□□ -1.93
Hmgb3O54879 Gm24666-201ENSMUST00000158937 167 ntBASIC2.99□□□□□ -1.93
Hmgb3O54879 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Hmgb3O54879 Gm16558-201ENSMUST00000163015 532 ntBASIC2.99□□□□□ -1.93
Hmgb3O54879 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Hmgb3O54879 Mir5098-201ENSMUST00000175320 82 ntBASIC2.99□□□□□ -1.93
Hmgb3O54879 Gm6625-201ENSMUST00000177870 272 ntBASIC2.99□□□□□ -1.93
Hmgb3O54879 Gm7094-201ENSMUST00000178379 366 ntBASIC2.99□□□□□ -1.93
Hmgb3O54879 Gm6947-201ENSMUST00000186254 78 ntBASIC2.99□□□□□ -1.93
Hmgb3O54879 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Hmgb3O54879 Gm20954-201ENSMUST00000189078 644 ntBASIC2.99□□□□□ -1.93
Hmgb3O54879 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC2.99□□□□□ -1.93
Hmgb3O54879 Gm43424-201ENSMUST00000200484 253 ntBASIC2.99□□□□□ -1.93
Hmgb3O54879 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC2.99□□□□□ -1.93
Hmgb3O54879 Gm20177-201ENSMUST00000203705 334 ntBASIC2.99□□□□□ -1.93
Hmgb3O54879 Gm43922-201ENSMUST00000205071 328 ntBASIC2.99□□□□□ -1.93
Hmgb3O54879 Gm20586-201ENSMUST00000210122 547 ntBASIC2.99□□□□□ -1.93
Hmgb3O54879 Gm18194-201ENSMUST00000210455 481 ntBASIC2.99□□□□□ -1.93
Hmgb3O54879 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC2.99□□□□□ -1.93
Hmgb3O54879 AC129323.1-201ENSMUST00000216733 470 ntBASIC2.99□□□□□ -1.93
Hmgb3O54879 Gm4057-201ENSMUST00000221407 368 ntBASIC2.99□□□□□ -1.93
Hmgb3O54879 AC168059.1-201ENSMUST00000225846 841 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms