Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Clk3O35492 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Clk3O35492 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC4.33□□□□□ -1.72
Clk3O35492 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Clk3O35492 Gm24160-201ENSMUST00000104594 126 ntBASIC4.33□□□□□ -1.72
Clk3O35492 Gm13902-201ENSMUST00000120168 605 ntBASIC4.33□□□□□ -1.72
Clk3O35492 Gm25447-201ENSMUST00000158997 128 ntBASIC4.33□□□□□ -1.72
Clk3O35492 Gm16318-201ENSMUST00000162402 601 ntBASIC4.33□□□□□ -1.72
Clk3O35492 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Clk3O35492 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC4.33□□□□□ -1.72
Clk3O35492 Gm20397-201ENSMUST00000174520 362 ntBASIC4.33□□□□□ -1.72
Clk3O35492 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC4.33□□□□□ -1.72
Clk3O35492 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Clk3O35492 Gm28263-201ENSMUST00000185884 400 ntBASIC4.33□□□□□ -1.72
Clk3O35492 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Clk3O35492 Gm28976-201ENSMUST00000188070 144 ntBASIC4.33□□□□□ -1.72
Clk3O35492 Gm28956-201ENSMUST00000189047 427 ntBASIC4.33□□□□□ -1.72
Clk3O35492 Gm29097-201ENSMUST00000190273 422 ntBASIC4.33□□□□□ -1.72
Clk3O35492 Gm28437-201ENSMUST00000190277 783 ntBASIC4.33□□□□□ -1.72
Clk3O35492 Gm29332-201ENSMUST00000190829 227 ntBASIC4.33□□□□□ -1.72
Clk3O35492 Gm29038-201ENSMUST00000191543 678 ntBASIC4.33□□□□□ -1.72
Clk3O35492 Ighv1-79-201ENSMUST00000200152 350 ntBASIC4.33□□□□□ -1.72
Clk3O35492 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.33□□□□□ -1.72
Clk3O35492 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC4.33□□□□□ -1.72
Clk3O35492 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Clk3O35492 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC4.33□□□□□ -1.72
Clk3O35492 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Clk3O35492 Gm3690-201ENSMUST00000211341 262 ntBASIC4.33□□□□□ -1.72
Clk3O35492 AC127279.1-201ENSMUST00000220140 637 ntBASIC4.33□□□□□ -1.72
Clk3O35492 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.33□□□□□ -1.72
Clk3O35492 AC164597.2-201ENSMUST00000226738 603 ntBASIC4.33□□□□□ -1.72
Clk3O35492 AC168062.2-201ENSMUST00000228907 422 ntBASIC4.33□□□□□ -1.72
Clk3O35492 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Clk3O35492 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Clk3O35492 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Clk3O35492 Gm7676-201ENSMUST00000084055 319 ntBASIC4.33□□□□□ -1.72
Clk3O35492 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Clk3O35492 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Clk3O35492 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Clk3O35492 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
Clk3O35492 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
Clk3O35492 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Clk3O35492 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Clk3O35492 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC4.32□□□□□ -1.72
Clk3O35492 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Clk3O35492 AC152981.1-201ENSMUST00000218320 2480 ntBASIC4.32□□□□□ -1.72
Clk3O35492 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
Clk3O35492 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Clk3O35492 Gm7269-201ENSMUST00000210819 1373 ntBASIC4.32□□□□□ -1.72
Clk3O35492 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Clk3O35492 Mir582-201ENSMUST00000103758 81 ntBASIC4.32□□□□□ -1.72
Clk3O35492 Gm22020-201ENSMUST00000104358 136 ntBASIC4.32□□□□□ -1.72
Clk3O35492 Mir208b-201ENSMUST00000104735 77 ntBASIC4.32□□□□□ -1.72
Clk3O35492 Gm5943-201ENSMUST00000119458 459 ntBASIC4.32□□□□□ -1.72
Clk3O35492 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Clk3O35492 Gm15905-201ENSMUST00000137042 298 ntBASIC4.32□□□□□ -1.72
Clk3O35492 Gm25456-201ENSMUST00000157952 109 ntBASIC4.32□□□□□ -1.72
Clk3O35492 Gm23513-201ENSMUST00000158181 133 ntBASIC4.32□□□□□ -1.72
Clk3O35492 Gm25923-201ENSMUST00000158312 138 ntBASIC4.32□□□□□ -1.72
Clk3O35492 Gm4222-201ENSMUST00000165784 470 ntBASIC4.32□□□□□ -1.72
Clk3O35492 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC4.32□□□□□ -1.72
Clk3O35492 Gm19807-201ENSMUST00000173971 667 ntBASIC4.32□□□□□ -1.72
Clk3O35492 Gm5473-201ENSMUST00000179326 642 ntBASIC4.32□□□□□ -1.72
Clk3O35492 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Clk3O35492 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC4.32□□□□□ -1.72
Clk3O35492 Gm29563-201ENSMUST00000187249 496 ntBASIC4.32□□□□□ -1.72
Clk3O35492 Gm43142-201ENSMUST00000198670 361 ntBASIC4.32□□□□□ -1.72
Clk3O35492 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Clk3O35492 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC4.32□□□□□ -1.72
Clk3O35492 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC4.32□□□□□ -1.72
Clk3O35492 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC4.32□□□□□ -1.72
Clk3O35492 Gm7333-201ENSMUST00000213449 1060 ntBASIC4.32□□□□□ -1.72
Clk3O35492 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Clk3O35492 Gm31931-201ENSMUST00000219666 222 ntBASIC4.32□□□□□ -1.72
Clk3O35492 AC155305.1-201ENSMUST00000222207 319 ntBASIC4.32□□□□□ -1.72
Clk3O35492 AC113031.2-201ENSMUST00000226132 579 ntBASIC4.32□□□□□ -1.72
Clk3O35492 CT009550.5-201ENSMUST00000226286 382 ntBASIC4.32□□□□□ -1.72
Clk3O35492 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Clk3O35492 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Clk3O35492 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Clk3O35492 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Clk3O35492 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Clk3O35492 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC4.32□□□□□ -1.72
Clk3O35492 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Clk3O35492 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Clk3O35492 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
Clk3O35492 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Clk3O35492 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Clk3O35492 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Clk3O35492 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Clk3O35492 Gm3623-201ENSMUST00000173643 2747 ntBASIC4.31□□□□□ -1.72
Clk3O35492 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
Clk3O35492 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Clk3O35492 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC4.31□□□□□ -1.72
Clk3O35492 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Clk3O35492 Gm16089-201ENSMUST00000117679 336 ntBASIC4.31□□□□□ -1.72
Clk3O35492 Gm13865-201ENSMUST00000120957 865 ntBASIC4.31□□□□□ -1.72
Clk3O35492 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC4.31□□□□□ -1.72
Clk3O35492 Gm14506-201ENSMUST00000121165 536 ntBASIC4.31□□□□□ -1.72
Clk3O35492 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms