Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Scn1aA2APX8 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Scn1aA2APX8 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.72□□□□□ -1.81
Scn1aA2APX8 AC154548.1-201ENSMUST00000225844 3838 ntBASIC3.72□□□□□ -1.81
Scn1aA2APX8 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC3.72□□□□□ -1.81
Scn1aA2APX8 Gm14811-201ENSMUST00000117070 117 ntBASIC3.71□□□□□ -1.81
Scn1aA2APX8 Gm12465-201ENSMUST00000118591 300 ntBASIC3.71□□□□□ -1.81
Scn1aA2APX8 Gm13873-201ENSMUST00000119208 427 ntBASIC3.71□□□□□ -1.81
Scn1aA2APX8 Gm11896-201ENSMUST00000121105 820 ntBASIC3.71□□□□□ -1.81
Scn1aA2APX8 Gm14649-201ENSMUST00000121814 324 ntBASIC3.71□□□□□ -1.81
Scn1aA2APX8 Gm24936-201ENSMUST00000122598 247 ntBASIC3.71□□□□□ -1.81
Scn1aA2APX8 Gm24537-201ENSMUST00000157950 102 ntBASIC3.71□□□□□ -1.81
Scn1aA2APX8 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Scn1aA2APX8 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
Scn1aA2APX8 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.71□□□□□ -1.81
Scn1aA2APX8 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC3.71□□□□□ -1.81
Scn1aA2APX8 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.71□□□□□ -1.81
Scn1aA2APX8 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC3.71□□□□□ -1.81
Scn1aA2APX8 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC3.71□□□□□ -1.81
Scn1aA2APX8 AC153932.1-201ENSMUST00000218558 787 ntBASIC3.71□□□□□ -1.81
Scn1aA2APX8 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC3.71□□□□□ -1.81
Scn1aA2APX8 Gm24533-201ENSMUST00000083138 196 ntBASIC3.71□□□□□ -1.81
Scn1aA2APX8 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Scn1aA2APX8 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.71□□□□□ -1.82
Scn1aA2APX8 Gm43923-201ENSMUST00000203992 2911 ntBASIC3.71□□□□□ -1.82
Scn1aA2APX8 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Scn1aA2APX8 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Scn1aA2APX8 Gm37470-201ENSMUST00000193378 2798 ntBASIC3.71□□□□□ -1.82
Scn1aA2APX8 Gm11913-201ENSMUST00000119094 336 ntBASIC3.71□□□□□ -1.82
Scn1aA2APX8 Gm6031-201ENSMUST00000121314 1054 ntBASIC3.71□□□□□ -1.82
Scn1aA2APX8 Gm24382-201ENSMUST00000122698 107 ntBASIC3.71□□□□□ -1.82
Scn1aA2APX8 Gm20561-201ENSMUST00000188131 292 ntBASIC3.71□□□□□ -1.82
Scn1aA2APX8 Gm38166-201ENSMUST00000191660 471 ntBASIC3.71□□□□□ -1.82
Scn1aA2APX8 Gm37490-201ENSMUST00000195566 724 ntBASIC3.71□□□□□ -1.82
Scn1aA2APX8 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Scn1aA2APX8 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Scn1aA2APX8 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
Scn1aA2APX8 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Scn1aA2APX8 Gm10356-201ENSMUST00000097152 1258 ntBASIC3.71□□□□□ -1.82
Scn1aA2APX8 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Scn1aA2APX8 AC154627.2-201ENSMUST00000227028 4669 ntBASIC3.71□□□□□ -1.82
Scn1aA2APX8 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Scn1aA2APX8 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.71□□□□□ -1.82
Scn1aA2APX8 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Scn1aA2APX8 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Scn1aA2APX8 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.7□□□□□ -1.82
Scn1aA2APX8 Gm9157-201ENSMUST00000117673 225 ntBASIC3.7□□□□□ -1.82
Scn1aA2APX8 Gm13771-201ENSMUST00000117988 238 ntBASIC3.7□□□□□ -1.82
Scn1aA2APX8 n-R5s30-201ENSMUST00000122624 122 ntBASIC3.7□□□□□ -1.82
Scn1aA2APX8 Gm23671-201ENSMUST00000157472 103 ntBASIC3.7□□□□□ -1.82
Scn1aA2APX8 Gm7281-201ENSMUST00000160010 543 ntBASIC3.7□□□□□ -1.82
Scn1aA2APX8 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.7□□□□□ -1.82
Scn1aA2APX8 Gm25942-201ENSMUST00000180080 110 ntBASIC3.7□□□□□ -1.82
Scn1aA2APX8 Gm27762-201ENSMUST00000183417 109 ntBASIC3.7□□□□□ -1.82
Scn1aA2APX8 Mir6715-201ENSMUST00000184990 57 ntBASIC3.7□□□□□ -1.82
Scn1aA2APX8 Gm18387-201ENSMUST00000220333 702 ntBASIC3.7□□□□□ -1.82
Scn1aA2APX8 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC3.7□□□□□ -1.82
Scn1aA2APX8 AC124489.2-201ENSMUST00000223930 589 ntBASIC3.7□□□□□ -1.82
Scn1aA2APX8 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Scn1aA2APX8 Gm2710-201ENSMUST00000073196 603 ntBASIC3.7□□□□□ -1.82
Scn1aA2APX8 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Scn1aA2APX8 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Scn1aA2APX8 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Scn1aA2APX8 Gm45223-201ENSMUST00000207037 5138 ntBASIC3.7□□□□□ -1.82
Scn1aA2APX8 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Scn1aA2APX8 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Scn1aA2APX8 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC3.7□□□□□ -1.82
Scn1aA2APX8 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Scn1aA2APX8 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Scn1aA2APX8 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC3.7□□□□□ -1.82
Scn1aA2APX8 Gm16420-201ENSMUST00000120258 856 ntBASIC3.7□□□□□ -1.82
Scn1aA2APX8 Gm15142-201ENSMUST00000121013 856 ntBASIC3.7□□□□□ -1.82
Scn1aA2APX8 Gm23775-201ENSMUST00000158991 249 ntBASIC3.7□□□□□ -1.82
Scn1aA2APX8 Mir5127-201ENSMUST00000175295 71 ntBASIC3.7□□□□□ -1.82
Scn1aA2APX8 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC3.7□□□□□ -1.82
Scn1aA2APX8 Gm28030-201ENSMUST00000184987 138 ntBASIC3.7□□□□□ -1.82
Scn1aA2APX8 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Scn1aA2APX8 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Scn1aA2APX8 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
Scn1aA2APX8 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Scn1aA2APX8 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.69□□□□□ -1.82
Scn1aA2APX8 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
Scn1aA2APX8 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Scn1aA2APX8 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Scn1aA2APX8 Gm42671-201ENSMUST00000198013 1604 ntBASIC3.69□□□□□ -1.82
Scn1aA2APX8 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC3.69□□□□□ -1.82
Scn1aA2APX8 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC3.69□□□□□ -1.82
Scn1aA2APX8 Gm25519-201ENSMUST00000158392 127 ntBASIC3.69□□□□□ -1.82
Scn1aA2APX8 Gm4207-201ENSMUST00000173144 960 ntBASIC3.69□□□□□ -1.82
Scn1aA2APX8 Gm25748-201ENSMUST00000175487 70 ntBASIC3.69□□□□□ -1.82
Scn1aA2APX8 Gm37900-201ENSMUST00000195510 3805 ntBASIC3.69□□□□□ -1.82
Scn1aA2APX8 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.69□□□□□ -1.82
Scn1aA2APX8 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Scn1aA2APX8 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC3.69□□□□□ -1.82
Scn1aA2APX8 Gm18597-201ENSMUST00000209519 694 ntBASIC3.69□□□□□ -1.82
Scn1aA2APX8 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC3.69□□□□□ -1.82
Scn1aA2APX8 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Scn1aA2APX8 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Scn1aA2APX8 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.69□□□□□ -1.82
Scn1aA2APX8 Gm42927-201ENSMUST00000200624 3841 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 99 ms