Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm6215-201ENSMUST00000119297 1386 ntBASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm43260-201ENSMUST00000197378 2430 ntBASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Mir761-201ENSMUST00000103245 76 ntBASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm12719-201ENSMUST00000118859 241 ntBASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm12294-201ENSMUST00000119723 490 ntBASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm11260-201ENSMUST00000121163 942 ntBASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm23465-201ENSMUST00000157134 262 ntBASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm22277-201ENSMUST00000157204 277 ntBASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm24939-201ENSMUST00000158325 137 ntBASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm19807-201ENSMUST00000173971 667 ntBASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm8902-201ENSMUST00000174341 1096 ntBASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm7897-201ENSMUST00000193981 554 ntBASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm17951-201ENSMUST00000198536 496 ntBASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm43710-201ENSMUST00000199583 452 ntBASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm19131-201ENSMUST00000203408 789 ntBASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm44092-201ENSMUST00000204470 258 ntBASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm17737-201ENSMUST00000210183 1147 ntBASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 AC161520.1-201ENSMUST00000210954 939 ntBASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 AL772397.1-201ENSMUST00000216707 606 ntBASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 AL645546.2-201ENSMUST00000224526 265 ntBASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 AC121542.1-201ENSMUST00000227245 721 ntBASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm15095-201ENSMUST00000118996 1430 ntBASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm23178-201ENSMUST00000116782 95 ntBASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm11406-201ENSMUST00000117418 484 ntBASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm14628-201ENSMUST00000117508 635 ntBASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm14388-201ENSMUST00000118119 477 ntBASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm16383-201ENSMUST00000118122 232 ntBASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm14172-201ENSMUST00000118255 644 ntBASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm14352-201ENSMUST00000119250 449 ntBASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm8051-201ENSMUST00000120464 466 ntBASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm16100-201ENSMUST00000120489 231 ntBASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm24592-201ENSMUST00000122505 106 ntBASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm22764-201ENSMUST00000158370 92 ntBASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm24417-201ENSMUST00000178123 79 ntBASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm24653-201ENSMUST00000178541 79 ntBASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm25934-201ENSMUST00000178642 79 ntBASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm2092-201ENSMUST00000178887 639 ntBASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm2759-201ENSMUST00000179938 639 ntBASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm27718-201ENSMUST00000183721 86 ntBASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm29228-201ENSMUST00000185489 418 ntBASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm38098-201ENSMUST00000194115 241 ntBASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm42454-201ENSMUST00000196805 1181 ntBASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 AC156803.1-201ENSMUST00000224407 820 ntBASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 AC174459.2-201ENSMUST00000226036 160 ntBASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.79□□□□□ -1.8
Pcdhgb8A0A140LI48 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms